Gene Information

Name : smpB (O3I_034120)
Accession : YP_006811747.1
Strain : Nocardia brasiliensis HUJEG-1
Genome accession: NC_018681
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7705344 - 7705817 bp
Length : 474 bp
Strand : -
Note : COG0691 tmRNA-binding protein

DNA sequence :
ATGAAGGAACAGGGGCGTAAGGTCATCGCGACCAATCGCCGGGCGCGGCACAACTACACGATCCTGGACGTCTACGAGGC
CGGGATCGCGCTGGTTGGTACCGAGGTCAAGAGCCTGCGTGAGGGCAAAGCCTCGCTGGTGGACGCGTTCGCGACGGTCG
ACAACGGCGAGGTGTGGCTGCGCGGGCTGCACATCCCGGAGTTCAGCCACGGCACCTGGACCAACCATTCCCCGCGCCGG
GTGCGGAAGCTGTTGCTGCACAAGCGTGAGATCGATCGCCTGGTCGGCAAGTCGCGGGAAGGCAACCAGACGCTGGTTCC
GCTGTCCATGTACTTCTCCGACGGCAAGGTGAAAGTCGAACTGGCTCTCGCCAAAGGTAAGCAGGACTACGACAAGCGCC
AGGACATGGCGAAGCGCACCGCAGAGCGTGAGGTCACCCGCGAGCTAGGGCGGCGGATCAAAGGCATGCGTTGA

Protein sequence :
MKEQGRKVIATNRRARHNYTILDVYEAGIALVGTEVKSLREGKASLVDAFATVDNGEVWLRGLHIPEFSHGTWTNHSPRR
VRKLLLHKREIDRLVGKSREGNQTLVPLSMYFSDGKVKVELALAKGKQDYDKRQDMAKRTAEREVTRELGRRIKGMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 1e-54 74
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 2e-31 49