Gene Information

Name : O3I_034015 (O3I_034015)
Accession : YP_006811726.1
Strain : Nocardia brasiliensis HUJEG-1
Genome accession: NC_018681
Putative virulence/resistance : Unknown
Product : putative periplasmic dipeptide-binding lipoprotein dppA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7680998 - 7682563 bp
Length : 1566 bp
Strand : -
Note : COG4166 ABC-type oligopeptide transport system, periplasmic component

DNA sequence :
ATGGCCACAAGCCTCGGCGCCACCGCATGTTCGTCGGACGGCGGTGCGGATTCGAGCATCGTGACCACCAATGCGGGGGA
GCCGCAGAACCCGCTGGTGCCCACCAACACCAACGAGAACATGGGCGGTCGCGTGGTCGACCGGCTGTGGGCCGGGCTGA
AGTACTACGACGCCGACGGCAAGGCGCACAACGAGGTCGCCGACAAGATCGAGACGACCGACCGGAAGAACTACAAGATC
ACCCTGAAGCCGGACTGGAAGTTCAGCGACGGCACACCGGTCACCGCGAAGTCGTATGTCGACGCCTGGAACTACGGCGC
GCTCAGCACGAACGCGCAGCTGCAGAGCTACGTGTTCAATCCGATCAAGGGCTTCAAGGACGTGTCGGCGGAGAACCCGA
CGGTCAAGACGATGTCCGGGCTGAAGGTGGTCGACGATCGCACCTTCACCGTCGAACTCGAATCGCCGTCCATCGACTTC
GAGACCGAACTCGGATACGCGCCGTTCTACCCGCTGCCGGAGGTGGCGTTCAAGGATATGAAGGCGTTCGGCGAGCACCC
GATCGGCAACGGGCCGTACAAATTCGCCAGCGACGCCGCGTGGCAGCACAACGTGCAGATCGACCTGGTGCCCAACCCGG
AGTACAAGGGCGGGCGGCCGGCCAAGAACGACGGTCTGCGCTTCGTGATGTACCAGTCGTTCGACACGGCGTACGCCGAT
CTGCAGGCGGGCAACCTCGACACCCTCGACGTGATCCCCGACAGCGCGATGGGCACCTACCAGCAGGACCTCGGCGATCG
CGCGATCACCAAGCCGATCGCGTACAAGGCGTCCATCGGCATCCAGACCACGGTGCCGCACTTCGGCGGCGAGGAAGGGT
TGCTCCGGCGCAAGGCGCTGTCGATGGCGATCAACCGGGAACAGATCTCGCAGAACATCTTCCACGGCACCCGGATTCCG
GCGCGGGACTTCACCGCGAGCACGCTGCCCGGCTTCAAGGGTGACCTGCCGGGCTCGGAGTTCCTGAAGTTCAACCCGAC
CGAGGCCAAGAAGCTGTGGGCCCAGGCCGATGCCATCTCGCCGTGGTCGGGCACGTACGAGATCGCCTACAACTCCGACG
GCGGCCACCAGGGCTGGGTCGAGGCCACCGCGAACAGCATCAAGAACACCCTCGGCATCGAGGCCGTCGGCACTCCGTAT
CCGACGTTCAAGACCATCCGGGACCTGATCAACGCCAAGACGATCAACAAGGCGTTCCGGTACGGCTGGCAGGGTGACTA
CCCGACGATGCTGCAGTTCCTCAGTGCGATGTACTACAGCTTCTCCGAGACCAACAACGTCAACTACAACAACCCCGAGT
TCGACAAACTGCTGAACGAGGCGCTGGCCGCGTCGACGCAGGAGGAGTCCTACAAGATCGTCGCGCAGGCGCAGACGCTG
TTGTTCAAGGACATGGCCGATATCCCGATGTTCGACTACCAGGCCGCCGCAGGCCGCTCGGAGAACATCAAGAAGGCCGA
GCTGGCCTGGAACGGACTGTTCGACTTCGAGGGAATCGAGAAGTAG

Protein sequence :
MATSLGATACSSDGGADSSIVTTNAGEPQNPLVPTNTNENMGGRVVDRLWAGLKYYDADGKAHNEVADKIETTDRKNYKI
TLKPDWKFSDGTPVTAKSYVDAWNYGALSTNAQLQSYVFNPIKGFKDVSAENPTVKTMSGLKVVDDRTFTVELESPSIDF
ETELGYAPFYPLPEVAFKDMKAFGEHPIGNGPYKFASDAAWQHNVQIDLVPNPEYKGGRPAKNDGLRFVMYQSFDTAYAD
LQAGNLDTLDVIPDSAMGTYQQDLGDRAITKPIAYKASIGIQTTVPHFGGEEGLLRRKALSMAINREQISQNIFHGTRIP
ARDFTASTLPGFKGDLPGSEFLKFNPTEAKKLWAQADAISPWSGTYEIAYNSDGGHQGWVEATANSIKNTLGIEAVGTPY
PTFKTIRDLINAKTINKAFRYGWQGDYPTMLQFLSAMYYSFSETNNVNYNNPEFDKLLNEALAASTQEESYKIVAQAQTL
LFKDMADIPMFDYQAAAGRSENIKKAELAWNGLFDFEGIEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0922 YP_005160014.1 putative peptide transport system secreted protein Not tested Not named Protein 7e-128 52