|
Name : O3I_033385 (O3I_033385) Accession : YP_006811600.1 Strain : Nocardia brasiliensis HUJEG-1 Genome accession: NC_018681 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein/permease Function : - COG functional category : - COG ID : - EC number : - Position : 7563842 - 7565674 bp Length : 1833 bp Strand : - Note : COG1132 ABC-type multidrug transport system, ATPase and permease components DNA sequence : ATGGACGCCATCGACCTCGCTGCGGCGACCGAGCGATCTGCGACGGTGGCGGACAGCGGCGGAACGGAACCGAGGGTGGC GGGGTTGGTGCGGCCTCATGCGCCTGCCTTCGTGCTGGTCGCGGTGTTGCAGATCGTCGGGGCGGTGGCCGGGTTGGCAC CGTTGCTCGCGGTGGTGGAGTTGGGGCGAACCCTGTTGTCGCCCGGGCCTGTCGACGACGGTCATGTGTGGGCAGTGGTC CTGGCAGGAGCCGGTGGACTACTGGTGCGACTGTTGTTCACCGGGGCGTCGTCGGGGGTCGGGCACCTGCTGGACGCACG GGTGCAGTTGTCGTTTCGCCGCCTGCTGGCGGCGCGGCTCGGGCGGGTGCCGATCGGCTGGTTCTCCCGTCGGCGGACCG GTGAGCTGGCGAAGGTGGTGGGGCCGGACGTGAGCGCGGTGCACCCGCTCATCGCGCACGCCCCGGGGGAACTGGTCGCC GCGTTCGTGGTGCCGCTGGTTTCGCTGGTCTACCTGTTCACCATCGATTGGCGGCTCACCTTGATCGCGATGATCCCGGT GCTGCTCGCGGTCGCGCACGTGCCGCTGTTCATGACGGCGAAGCGACAGCGGGAACAAGCGGAGATCGATGCGGCGATGG GCCGGATCTCCAGTGCCGCCATCGAATTCGTGCAGGGCATCGCGGTGATCAAGGCGTTCGGCGGCGGGGCTCGCGCCCAC CGCGAGTTCCGTACGGCGGCAGACACTTTCACCGAGACGTTCCGGCGCTGGGTGTTCGGTATCTCCGGCATCGCGGCGGG TATGCAACTGGCGCTGTCGCCGCCGTTCGTGTTGCTGGTGCTATTGCTCGGTGGCACGGCGTTGATCACGAACGGTTCAC TGGCGCCGGCGGATCTGCTTCCGTTCCTGCTGCTCGGGCTGGGGCTGACCGCGCCGGTGGCGGCCCTGGGGCACGGCTTC GACGACCTGCAGGCCGCCGGGCGCGCGGTCGGCCGGATCAAAGAGGTGCTCGCGGTGGCGCCGCTGCCGGAGCCCGCGCA ACCGGTTGTGCCGCAGGGACATCGGGTCGAACTGCGCGAGGTCCGGTTCGGCTATGCCGCCGACCGCGAGGTGCTGCGCG GCATCGACCTGGTGCTCGAACCGGGGACGGTCACCGCGCTCGTCGGCCCCTCGGGTAGCGGCAAGTCGACGCTGGTGCAG CTGTTGCCCCGGTTCTTCGATCCCCGCCACGGCTCGGTCACCCTGGGCGGTGCCGACCTGCGCGACCTGAGCAGCGCGGA GCTGTATCGGCGGGTCGCCTTCGTGTTCCAGGACGTCCGTCTACTACGCGCGTCGATCGCCGACAACATCGCGCTCGCGG TGCCGCACGCGGATCGTGCGGACGTGGAGCGCATCGCCCGGCTGGCGAACATTCACGACCGGATCCTCGAACTGCCCCAC GGGTACGACTCGGTCGTCGGCGTCGACGTGCAACTGTCCGGCGGTGAGGCACAACGGATTTCAATCGCTCGCGCGCTGCT CTCCGCCGTCCCGGTGCTGGTATTGGACGAAGCGACGGCGTTCGCCGACCCGCAGACCGAGCATGCGGTGCGCACCGCGC TCGCGACCGTGCGCGGGGACCGGACGATGCTGGTCATCGCGCACCGGCTGGAGACCGTCGCCGACGCGGACATCGTCGCG GTACTCGACGACGGCGTCATCGTCGAGCGCGGTCGTCCGGCCGAATTACTCGAACAGAACGGCAAGTTCGCCGAATTCTG GCGATCCCACCGGGCCGCGCTCACCGACGAGATCGAAACCTACGGTGGCGCACTGCAAGGAGAACTCCGATGA Protein sequence : MDAIDLAAATERSATVADSGGTEPRVAGLVRPHAPAFVLVAVLQIVGAVAGLAPLLAVVELGRTLLSPGPVDDGHVWAVV LAGAGGLLVRLLFTGASSGVGHLLDARVQLSFRRLLAARLGRVPIGWFSRRRTGELAKVVGPDVSAVHPLIAHAPGELVA AFVVPLVSLVYLFTIDWRLTLIAMIPVLLAVAHVPLFMTAKRQREQAEIDAAMGRISSAAIEFVQGIAVIKAFGGGARAH REFRTAADTFTETFRRWVFGISGIAAGMQLALSPPFVLLVLLLGGTALITNGSLAPADLLPFLLLGLGLTAPVAALGHGF DDLQAAGRAVGRIKEVLAVAPLPEPAQPVVPQGHRVELREVRFGYAADREVLRGIDLVLEPGTVTALVGPSGSGKSTLVQ LLPRFFDPRHGSVTLGGADLRDLSSAELYRRVAFVFQDVRLLRASIADNIALAVPHADRADVERIARLANIHDRILELPH GYDSVVGVDVQLSGGEAQRISIARALLSAVPVLVLDEATAFADPQTEHAVRTALATVRGDRTMLVIAHRLETVADADIVA VLDDGVIVERGRPAELLEQNGKFAEFWRSHRAALTDEIETYGGALQGELR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| irp2K | YP_005163491.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 6e-68 | 41 |
| irp2K | YP_005134503.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 5e-68 | 41 |
| CDPW8_2175 | YP_005143723.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 6e-66 | 41 |
