Gene Information

Name : O3I_031395 (O3I_031395)
Accession : YP_006811202.1
Strain : Nocardia brasiliensis HUJEG-1
Genome accession: NC_018681
Putative virulence/resistance : Virulence
Product : two-component system response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7107613 - 7108359 bp
Length : 747 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence :
ATGACGACAGTGGAGTCCACGACCACACAGGAAGTCGCGATGACCGAGAAGAAGCAGGACGCCCCGGCGGTCAAGGTGCT
GGTGGTCGACGACGAACCGCAGATCGTGCGCGCGTTGCGGATCAACCTGTCGGTCCGCGGCTACGAGGTGATCACCGCGG
GCACCGGCGGCGCCGCGTTGCGCGCGGCCGCCGACAAACATCCCGATGTGGTGATCCTCGACCTCGGGTTGCCCGATATC
GACGGCATCGAGGTGCTCGCCGGGCTGCGTGGCTGGACCTCGGCGCCGGTGATCGTGCTCTCGGCGCGCACCGACTCGGC
GGACAAGGTCGAGGCGCTCGACGCGGGCGCCGACGACTACGTCACCAAGCCGTTCGGGATGGACGAGCTGCTCGCCCGGC
TGCGCGCCGCGGTCCGGCGCGGTGCCACCGATACCGACGCGTCCGATCCGGTGGTGGTGACCTCGTCGTTCACCGTCGAC
CTCGCGGCCAAGAAGGTCACCAAGAACGACGAGACGGTGCATCTGACCCCGACCGAATGGGGCATGCTCGAGATGCTGGT
CCGTAACCGCGGCAAGCTGGTCGGCCGCAAAGAGCTGCTGCGCGAGGTGTGGGGTCCGTCGTACGCGACGGAAACCCACT
ACCTGCGGGTGTATCTGGCCCAGCTGCGACGCAAGCTCGAGGACGACCCCTCACACCCCAAACACCTGCTCACCGAAGCG
GGCATGGGCTACCGCTTCCAGGAGTGA

Protein sequence :
MTTVESTTTQEVAMTEKKQDAPAVKVLVVDDEPQIVRALRINLSVRGYEVITAGTGGAALRAAADKHPDVVILDLGLPDI
DGIEVLAGLRGWTSAPVIVLSARTDSADKVEALDAGADDYVTKPFGMDELLARLRAAVRRGATDTDASDPVVVTSSFTVD
LAAKKVTKNDETVHLTPTEWGMLEMLVRNRGKLVGRKELLREVWGPSYATETHYLRVYLAQLRRKLEDDPSHPKHLLTEA
GMGYRFQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 1e-33 42
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 8e-34 42
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 3e-30 41
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 4e-30 41
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 4e-30 41
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 4e-30 41
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 4e-30 41
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 4e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3I_031395 YP_006811202.1 two-component system response regulator VFG1390 Protein 7e-29 41