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Name : O3I_031350 (O3I_031350) Accession : YP_006811193.1 Strain : Nocardia brasiliensis HUJEG-1 Genome accession: NC_018681 Putative virulence/resistance : Resistance Product : chloramphenicol resistance protein Function : - COG functional category : - COG ID : - EC number : - Position : 7100558 - 7101745 bp Length : 1188 bp Strand : + Note : COG2814 Arabinose efflux permease DNA sequence : ATGGGTGTCGCCGTGTTCGCGCAGGGGACATCGGAGTTCATGTTGTCGGGCTTGCTGGAGCCCATATCGCGGGATGTCGG GGTATCGCTCGGTGCGGCGGGCGCGCTGACGTCGCTGTTCGCGGTCGGGATGATCGTGGGGGCACCGCTGATGGCGATGA CGGCGGGACGGTGGCCGGTGCGCTCCGCACTGACCGGGTTTCTGGCGTTGTTCATCGGTGCGCATGCGGTCGGCGCGCTG ACCGCGAATTTCGTTGTGCTGCTTGCTACTCGACTGGTAGCGGCGGTGGCTTACGCGGGGTTTCTGTCCGTGGCGCTGGC GTCGTTGCCCGCCCTGGTCGGCGCGGCCCGGGTCGGCCGGGCGACGGCGATCATCCTGTCCGGTGTGACGCTGGCGTGCA TCGTCGGCGTCCCGGCGGGTGCGCTCCTCGGCCAGACGTGGGGCTGGCGGTCAGCGTTCTGGGCCGTCGTGGCGGCCAGT GTTCCTGCGCTGGTGGCGCTTTGGGGGCTCGTTCGCGTGCGGATCGAGCCGGCCACGACCGCCGAAGGCGGGGTGATCCG GCGGGAATGGCGAGCGATCACCGAACGGCCGGTACGGATGGTGCTGGTCGCGGGGGCTCTGGTCAACGCCGCGACGTTCG CCTCGTTCACCTACCTCGCCGTGCTGACCACGGAGGTCGGCGGTGCCGGAAAAGGGTGGGTACCGGTGATTTTGGCTCTG TTCGGCCTCGGCTCCTTCCTCGGCGTCAGCCTCGGCGGACACTACGCCGATCGCTACGCCACTCCCCTCGTCACGATCGG CTCGGGGGCGCTGATATTCGCTTGGTCCACAACCGCTTTGACGGCGAAGTACCTGCCCGTCCTGCTGATCATGACCACTG TCTGTGGCGCGGCATCCTTCGCGGTCGGCTCCACCCTGATCGGCCGCATCGTCAGTGCCGCGACGCCGACGGCTCCCCGG CTGAGCGGCGCTTTCGCCACCGCCACCCTCAACATCGGTGCGGCTACCGGCCCCGCGGTCGCGGGCATCGCGATCACCTG GGCCGGCACACCGAGCGCCGCGGTCTGGACCAGCGCGGTGATCTGTTGCGCCGCAACGGCTGTCGCACTGATCGGCACCC GCCCGCAGCGCGGGATCAGCGAACCGCTTTCCGCCACACCGCCGCAGTCGCACCGGCCAAGGCGGTGA Protein sequence : MGVAVFAQGTSEFMLSGLLEPISRDVGVSLGAAGALTSLFAVGMIVGAPLMAMTAGRWPVRSALTGFLALFIGAHAVGAL TANFVVLLATRLVAAVAYAGFLSVALASLPALVGAARVGRATAIILSGVTLACIVGVPAGALLGQTWGWRSAFWAVVAAS VPALVALWGLVRVRIEPATTAEGGVIRREWRAITERPVRMVLVAGALVNAATFASFTYLAVLTTEVGGAGKGWVPVILAL FGLGSFLGVSLGGHYADRYATPLVTIGSGALIFAWSTTALTAKYLPVLLIMTTVCGAASFAVGSTLIGRIVSAATPTAPR LSGAFATATLNIGAATGPAVAGIAITWAGTPSAAVWTSAVICCAATAVALIGTRPQRGISEPLSATPPQSHRPRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cmx | YP_005160007.1 | chloramphenicol exporter | Not tested | Not named | Protein | 4e-44 | 44 |
| cmx2 | YP_001800935.1 | chloramphenicol exporter | Not tested | Not named | Protein | 4e-44 | 44 |
