Gene Information

Name : O3I_029845 (O3I_029845)
Accession : YP_006810892.1
Strain : Nocardia brasiliensis HUJEG-1
Genome accession: NC_018681
Putative virulence/resistance : Resistance
Product : TetR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6783461 - 6784108 bp
Length : 648 bp
Strand : -
Note : COG1309 Transcriptional regulator

DNA sequence :
GTGAAGTTGGATACGCAGGTCATCGCGCAGGCCGCGCTCGATCTCCTGGACGAAGTCGGCCTGGATGGTCTGACCATGCG
GAAAGTGGCGGCCGCGCTGGACGTGCAAGCTCCGGCGCTGTACTGGCATGTCGCGAACAAGCGTGAGCTGCTCGATGCCA
TGGCGCGCAACGTCTTCGTCGCCGCTATCGATGGAGTGGAAGCGCCGCGGCGGGGTGAGGAATGGGACGAGTGGGTGATG
CGGCTCGCCGGTCGGCTGCGCCGGTCGATGCTGCGCTACCGGGACGGTGCGAAGGTGCTCGCGGGCACCTACATCAACGA
CGAAGCAATGTGGCGCACAGTGGAATTGACGTTGCGCACGCTGGAAGATGCAGGTTTCTCGACCCTGGACGCCGGCCGGG
TCTTTCCGGTACTACTGCATTACACAACGGGATTCGTCATCGAAGAGCAGGCGCGCCTCGGCACGGATTACGACCGCAAC
CCCTACGGAATGGACCAGCTCGGGCAGGCGATGAACGCCGACCGCTATCCGTTGACCACGCACATGGTGACGCGATTCGC
CGACGCGGACTCCGACGACGAGTTCACCCACGGCCTGCGCGTGATCGTCGCCGGAATCCTCGCTACCCGAACGGATCAGC
CCACCTGA

Protein sequence :
MKLDTQVIAQAALDLLDEVGLDGLTMRKVAAALDVQAPALYWHVANKRELLDAMARNVFVAAIDGVEAPRRGEEWDEWVM
RLAGRLRRSMLRYRDGAKVLAGTYINDEAMWRTVELTLRTLEDAGFSTLDAGRVFPVLLHYTTGFVIEEQARLGTDYDRN
PYGMDQLGQAMNADRYPLTTHMVTRFADADSDDEFTHGLRVIVAGILATRTDQPT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetR(A) AGK07084.1 TetR(A) Not tested SGI1 Protein 5e-19 41
tetR YP_006098395.1 tetracycline repressor Not tested Tn2411 Protein 7e-19 41
tetR(A) ACK44536.1 TetR(A) Not tested SGI1 Protein 5e-19 41
tetR(A) AGK07026.1 TetR(A) Not tested SGI1 Protein 5e-19 41
tetR(A) ACN81010.1 repressor protein Not tested AbaR5 Protein 8e-19 41
tetR CAJ77065.1 Tetracycline repressor protein Not tested AbaR1 Protein 5e-19 41