Gene Information

Name : O3I_026250 (O3I_026250)
Accession : YP_006810173.1
Strain : Nocardia brasiliensis HUJEG-1
Genome accession: NC_018681
Putative virulence/resistance : Resistance
Product : ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5985715 - 5986473 bp
Length : 759 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGACCCGCTCCCCCGGCCACGATCACCGCGCGACCACGATGCCCTCGGCCACCACACTCGCTGTGCTGCGCGGCGTTTC
GAAAACCTTCGGCAGCGCGGACACGGCCGTGCACGCACTGGCCGAGTGTGATCTGACCATCGCGGCGGGCGAATTACTCG
TCGTGCTGGGCCCTTCGGGCTCGGGCAAGACCACCCTGCTCAATGTGCTCGGCGGGATCGAGACCCCGACCACCGGGGTG
ATCAGCATCGACGGGCACACCCTCACCGACCTGGACGCGAAGGGCATGGCGGCGCTGCGCCGCACCGCGCTGAGCTTCGT
CTACCAGTTCTTCAACCTCGTGCCGACGCTGACGGCCGCCGAGAACATCGCCGTACTCGCCGAATTGACCGGCGGACCGG
TCGGCGCCCGGGTACACGACGTGTTGACCCAGGTGGGCTTGGCCGACTGCGCGGATCGTTTTCCGGCCCAGCTCTCGGGC
GGTCAGCAGCAGCGGGTCGCCATCGCACGGGCACTGGTGAACCGGCCGCGGCTGCTGCTGTGTGACGAACCGACGGGTGC
GCTGGACCTGGACACCGGACGCAGCGTGCTGGCCCTGCTGCAACGACTGTGCCACCGGGAAGACCACGCGGTCGTGCTGG
TCACCCACAACCAGGCCATCGCCGCCATCGCCGACCGGGTGCTGCGTATGCGGTCCGGACGCATCGTCGCCGACCTCCAG
CAGGCCGCGCCACTGCCCGCGGATGAGGTCGCCTGGTGA

Protein sequence : 
MTRSPGHDHRATTMPSATTLAVLRGVSKTFGSADTAVHALAECDLTIAAGELLVVLGPSGSGKTTLLNVLGGIETPTTGV
ISIDGHTLTDLDAKGMAALRRTALSFVYQFFNLVPTLTAAENIAVLAELTGGPVGARVHDVLTQVGLADCADRFPAQLSG
GQQQRVAIARALVNRPRLLLCDEPTGALDLDTGRSVLALLQRLCHREDHAVVLVTHNQAIAAIADRVLRMRSGRIVADLQ
QAAPLPADEVAW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-41 47
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-41 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-41 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-41 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3I_026250 YP_006810173.1 ATPase NC_008702.1.4606598. Protein 3e-37 47
O3I_026250 YP_006810173.1 ATPase NC_012469.1.7685735. Protein 2e-46 47
O3I_026250 YP_006810173.1 ATPase CP001581.1.gene798.p Protein 6e-42 41