|
Name : O3I_025430 (O3I_025430) Accession : YP_006810011.1 Strain : Nocardia brasiliensis HUJEG-1 Genome accession: NC_018681 Putative virulence/resistance : Virulence Product : ABC transporter permease Function : - COG functional category : - COG ID : - EC number : - Position : 5821084 - 5822094 bp Length : 1011 bp Strand : - Note : COG0609 ABC-type Fe3+-siderophore transport system, permease component DNA sequence : ATGGACCTGCCGAGCAACCAGCCCCTGCGCTGGTCAGGGTGGTTGTTGGCGGCGGCGGTGCTGGCTGCCGCGTGCCTGCT GAGCCTGATCGTGGGCACGAAAGCGATTCCGCTCGGGGAAGTCTGGGCCGCGCTCTGGGGCGGAGACGGCTCGCCCGATC ACCTGATCGTGACCGAATACCGCCTGCCGCGCACCCTGCTCGGCCTGCTCGCCGGGCTCGCGCTGGGTGTCGCGGGCTGC CTGATGCAGGGACTCACCCGCAACCCCCTGGCCGATCCCGGCCTGCTCGGCATCAACGCGGGCGCGGCCTTCGCGATCAC GCTCGCGGTCGCGTTCCTGGGCGTCACCCAGATCACGGCGTACGTCTGGTTCGGCTTCGCCGGGGCCGCCCTGGTATCGC TGGTGGTGTACCGGCTGGGCACCGCGGGCAGGCAGGGGTCGGATCCGATCCGCCTGACCCTGGCCGGCGTCGCGGTGACC GCGGTGCTCTCCGGCCTGACCAAGGGCCTGATCCTGTTGAACCCCAAGGCCTTCGAGGAGTGGCGGCAGTGGGATTCGGG TTCGCTGACCGGGCGCGGCTACGACGTCATCGGGGGCGCGGCGCCGTTCATCGTCGTCGGCTTGCTCGCCGCGGTGGTCG CCGCCCGCTCGCTGAACGCCCTCGCGCTCGGTGACGACCTCGCCCGTTCGCTCGGCGTGCACGTCGGGCGTTCCCGGCTG CTCACCGCGGTGGCGCTGACGCTGCTGTGCGGCACGGCAACCGCGGCGGTGGGGCCGATCACCTTCGTCGGGCTGGCGGT GCCGCACGTGGCGCGCTGGATCGTGGGCCCGGACCAGCGCTGGATCATCGCCTATTCGATGTTGCTCGCACCGATCCTGG TGCTCGGCTCGGATGTGATCGGCCGCATCATCATTCGGCCCGACGAGGTGCCCGCCGGCCTGGTGACCGCGTTCGTCGGT GCGCCGGTGCTGATCTGGCTGGCCCGGCGCGACCGGGTGAGTGCCGCGTGA Protein sequence : MDLPSNQPLRWSGWLLAAAVLAAACLLSLIVGTKAIPLGEVWAALWGGDGSPDHLIVTEYRLPRTLLGLLAGLALGVAGC LMQGLTRNPLADPGLLGINAGAAFAITLAVAFLGVTQITAYVWFGFAGAALVSLVVYRLGTAGRQGSDPIRLTLAGVAVT AVLSGLTKGLILLNPKAFEEWRQWDSGSLTGRGYDVIGGAAPFIVVGLLAAVVAARSLNALALGDDLARSLGVHVGRSRL LTAVALTLLCGTATAAVGPITFVGLAVPHVARWIVGPDQRWIIAYSMLLAPILVLGSDVIGRIIIRPDEVPAGLVTAFVG APVLIWLARRDRVSAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fagA | YP_005680309.1 | hypothetical protein | Not tested | PiCp 1 | Protein | 8e-27 | 45 |
| fagA | YP_005682399.1 | hypothetical protein | Virulence | PiCp 1 | Protein | 8e-27 | 45 |
| fagA | YP_003782432.1 | integral membrane protein | Virulence | PiCp 1 | Protein | 8e-27 | 45 |
| fagA | YP_005684490.1 | hypothetical protein | Not tested | PiCp 1 | Protein | 8e-27 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| O3I_025430 | YP_006810011.1 | ABC transporter permease | VFG0926 | Protein | 9e-40 | 50 |
