Gene Information

Name : O3I_025425 (O3I_025425)
Accession : YP_006810010.1
Strain : Nocardia brasiliensis HUJEG-1
Genome accession: NC_018681
Putative virulence/resistance : Virulence
Product : ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5820035 - 5821087 bp
Length : 1053 bp
Strand : -
Note : COG4779 ABC-type enterobactin transport system, permease component

DNA sequence :
GTGAGCGCCCCGATCGATTTCGGCCGGACGATGGTGGTGCTGCGCGCCCCGCGCGGGTTCGGCGCGCGCATCAGCGTGCG
CACCACTCTCGTCTGCGTGGTGCTGCTGGTCGCCGCGTTCGCGGTGGCCGTACTCGCCCTCGGCACCGGCGATTACGTGA
TCCCGCCGGACCGGGTGCTCCGGGCCCTGTTGGTCGGGGACAACCGATTCGATCGGCTCGTGGTGTGGCAGTGGCGTTTT
CCCCGCGTGGTTCTGGCCCTGGCACTGGGCGCGGCGCTGGGTCTCAGCGGCGCGATCCTGCAGTCGGTGACCCGGAACCC
GCTGGGCAGCCCCGATATCGTCGGCTTCAACACCGGCGCCTACACCGGCGCGCTGCTGGTACTGCTCGCCGTCGGCGGCG
GCCACTTCCAGACCGCTCTCGGTGCGCTGATCGGTGGTCTCGCGGCGGCCCTGGTCATTCAGCTGCTCGCGTTCCGCAAC
AACGTCACCGGCTTCCGGTTGATCATCATCGGTATCGGCGTCAGCGCGATGCTGGCCTCGGTGAACACCTGGCTCATCCT
GCGCGCCGATCTGAACTCCGCGATGTCGGCCGCGGCCTGGGGCGCGGGCTCGTTGAACGGATTGTCCTGGCCGCAGGTGG
GTCCCGCGCTCATCCTGCTGGGAGTGCTCGCGCTGCTCGTGATTCCGGCCGCACCGCGGCTGCATGTCCTGGAACTCGGT
GACGATCTGGCGAGTTCGTTCGGCGTCCGGGTCGGGCGGACGCGGCTGCTGCTGATCGTGTTGAGCGTCGCGCTGACCGC
GGTCGCCACCGCCGTCGCGGGGCCGATCGCGTTCGTCGCCCTCGCCGCACCGCAATTGGGCCGCCGGCTCGCCCGCAGCC
CGTCGACCGCCCTCGCGCCGGCCGCGGCGATGGGCGCGCTGCTGCTGATCGCCGGTGACTGGGTCGCGCAGCGCGCGTTC
GCGCCGACGCAGCTGCCCGTCGGCGTGGTGACCGTCTCGATCGGCGGCCTGTATCTGGCGTACCTGCTGGTGACCGAGGC
ACGGCGGACCTAG

Protein sequence :
MSAPIDFGRTMVVLRAPRGFGARISVRTTLVCVVLLVAAFAVAVLALGTGDYVIPPDRVLRALLVGDNRFDRLVVWQWRF
PRVVLALALGAALGLSGAILQSVTRNPLGSPDIVGFNTGAYTGALLVLLAVGGGHFQTALGALIGGLAAALVIQLLAFRN
NVTGFRLIIIGIGVSAMLASVNTWLILRADLNSAMSAAAWGAGSLNGLSWPQVGPALILLGVLALLVIPAAPRLHVLELG
DDLASSFGVRVGRTRLLLIVLSVALTAVATAVAGPIAFVALAAPQLGRRLARSPSTALAPAAAMGALLLIAGDWVAQRAF
APTQLPVGVVTVSIGGLYLAYLLVTEARRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 2e-28 51
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 1e-28 51
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 1e-28 51
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 1e-28 51
iusC YP_005143744.1 iron ABC transporter permease Virulence Not named Protein 3e-11 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3I_025425 YP_006810010.1 ABC transporter permease VFG0928 Protein 6e-29 50