Gene Information

Name : O3I_025420 (O3I_025420)
Accession : YP_006810009.1
Strain : Nocardia brasiliensis HUJEG-1
Genome accession: NC_018681
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5819157 - 5820005 bp
Length : 849 bp
Strand : -
Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence : 
ATGAGCGAAAACAACGGCGCCCCGGTCGAATCGGGCGTCGGCGCCGCGAAACAGGCTGCGCTGCGGGCCGATCGGGTGCG
CCTGGGTTACCGCGGCCGCACGATCAGCGACCAGCTGTCCGTCGACGTGCCGGACGGCGAGTTCACCGTAGTGATCGGCC
CGAACGCGTGCGGCAAGTCCACGCTGCTGCGCGCCCTGGCCCGCCTGCTCGCCCCGGAATCCGGCGCGGTGCTGCTGGAC
GGCAAGTCCATCGCCACCTATCCGGCGAAGGAGGTGGCCCGCCGGATCGGCCTGCTGCCGCAGACTTCCCTCGCGCCGGA
CGGCATCCGGGTGGCCGACCTGGTCGCGCGCGGCCGGTACCCGCATCAGTCGCTGCTGCGCCAGTGGTCACAGGCCGACG
CGGACGCGGTGGCGGCGGCCATGGCCGCGACCGGTGTCACCGAACTGTCGGCGCGTCCGGTCGACGAGCTGTCCGGCGGG
CAGCGCCAGCGCGTGTGGATCGCCATGGTGCTCGCGCAGGACACCCCGGTGATCCTGCTCGACGAACCGACCACCTACCT
CGATATCGCGCACCAGATCCACCTGCTCGACCTGTGCCGGGCGCTGCATCGCGACTCCGGGCGCACCGTGGTCGCGGTCC
TGCACGACCTGAACCACGCCTTCCGCTACGCGGGCCACCTCATCGCGATGAAGGACGGCCGGGTGGTCGCCGCGGGCCCG
CCGAAGCAGATCGTCACCGCCGAATTGGTGCGCGAGGTCTTCGATCTCGGGTGCCGGATCATCGACGACCCGGAAACCGG
TGCGCCACTGGTCATCCCGCTTGCCGAGAATGCCGCCCGCGTCGGCTGA

Protein sequence : 
MSENNGAPVESGVGAAKQAALRADRVRLGYRGRTISDQLSVDVPDGEFTVVIGPNACGKSTLLRALARLLAPESGAVLLD
GKSIATYPAKEVARRIGLLPQTSLAPDGIRVADLVARGRYPHQSLLRQWSQADADAVAAAMAATGVTELSARPVDELSGG
QRQRVWIAMVLAQDTPVILLDEPTTYLDIAHQIHLLDLCRALHRDSGRTVVAVLHDLNHAFRYAGHLIAMKDGRVVAAGP
PKQIVTAELVREVFDLGCRIIDDPETGAPLVIPLAENAARVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-60 52
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-65 51
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-65 51
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-65 51
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-65 51
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 6e-47 48
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-45 47
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 4e-55 45
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 4e-55 45
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-47 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-47 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-47 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-47 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3I_025420 YP_006810009.1 ABC transporter ATP-binding protein BAC0164 Protein 4e-47 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3I_025420 YP_006810009.1 ABC transporter ATP-binding protein VFG0925 Protein 1e-70 59
O3I_025420 YP_006810009.1 ABC transporter ATP-binding protein VFG1042 Protein 3e-47 48