Gene Information

Name : O3I_002490 (O3I_002490)
Accession : YP_006805435.1
Strain : Nocardia brasiliensis HUJEG-1
Genome accession: NC_018681
Putative virulence/resistance : Unknown
Product : acyl-CoA dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 565471 - 566649 bp
Length : 1179 bp
Strand : -
Note : COG1960 Acyl-CoA dehydrogenases

DNA sequence :
ATGATCGACTTCTCGATTCCCGCCGAGCTCGCCGCCGAACGCGATCGGGTTCGCCGGTTCGTCATCGACAAGATCGTTCC
GTTCGAGCGCGATCCGCGCCTGACCGCGCACGGGCCGACCGACGAACTGCGGCAGGAATTGGTCGAACTCGCGCGGGCCG
AGAAGTTGCTGACCGTGCAGGCGCCGGAAGCGCTCGGCGGCCGCGGGCTCAGCCACATCGAGCAGGCGGTGCTCTACGAG
GCCGCGGGCTGGTCGACCCTCGGCCCGATCGCGATGAACTGCGCGGCGCCCGACGAGGGCAATATGTTCCTGCTGTCCAA
GGTCGCGAACCCGGACCAGGTAGAGCGCTACCTCGCGCCGGTGGTCGCCGGACATCAGCGGTCGGTGTTCGCGATGACCG
AGCCGGACGGCGCGGGCTCGGACCCGGCACAGCTGGCCACCACCGCGACGTTCGACGGCGAGAACTTCACCCTCGACGGC
CGCAAGTGGCTGATCACCGGGGCCAACGGCGCCAAAACGTGGATCATCATGGCCCGGCTCGCCGAGAACCCGCACCTGCC
CGCGGGACCGACCCTGTTCCTCACCGACGGCGATCAGCCGGGCATCGTGATCGAACGCACCATGAACACGATGGACCGCA
ACTACGTCGCCGGGCACGGCGTGGTCCGCTTCGACAACCTCACGCTGCCGAAATCGGCGCTGCTCGGCGAGGCCGGGCAG
GCCCTGCGCTACGCCCAGCTGCGGCTGGCCCCGGCCCGGCTCACGCACTGCATGCGCTGGCTGGGCGCGGCCGAACGCGC
GCAGAGCATCGCGGTCGAGCACGCGCGCACCCGGACCGCGTTCGGCAAGCCGATCGGCGAGCACGAGGGTGTGTCGTTCA
TGTTGGCGGACAACGAGGTCGCGCTGCACCAGTGCCGGCTCACCATCTGGCACGCCTGCTGGCTGATGGATCAGGGCGAG
AAGGCGCGGCACGAGAGCTCGATCGCCAAATCGTTCGTCTCCGAGGAACTCTTCAAGGTCGCCGACCGGTGCGTGCAGGT
CTTGGGCGGGATCGGCATCAGCGACGAGACCGTGGTCGAGATGATCTTCCGGGACATCCGCGCCTTCCGGCTCTACGACG
GCCCGACCGAAGTCCACAAATACGCCATCGGTCGCAAGGTGCTGCGCACGGTCCAGTAG

Protein sequence :
MIDFSIPAELAAERDRVRRFVIDKIVPFERDPRLTAHGPTDELRQELVELARAEKLLTVQAPEALGGRGLSHIEQAVLYE
AAGWSTLGPIAMNCAAPDEGNMFLLSKVANPDQVERYLAPVVAGHQRSVFAMTEPDGAGSDPAQLATTATFDGENFTLDG
RKWLITGANGAKTWIIMARLAENPHLPAGPTLFLTDGDQPGIVIERTMNTMDRNYVAGHGVVRFDNLTLPKSALLGEAGQ
ALRYAQLRLAPARLTHCMRWLGAAERAQSIAVEHARTRTAFGKPIGEHEGVSFMLADNEVALHQCRLTIWHACWLMDQGE
KARHESSIAKSFVSEELFKVADRCVQVLGGIGISDETVVEMIFRDIRAFRLYDGPTEVHKYAIGRKVLRTVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01498.1 putative acyl-CoA dehydrogenase Not tested PAGI-1 Protein 5e-104 55