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Name : O3I_002340 (O3I_002340) Accession : YP_006805405.1 Strain : Nocardia brasiliensis HUJEG-1 Genome accession: NC_018681 Putative virulence/resistance : Virulence Product : Clp protease Function : - COG functional category : - COG ID : - EC number : - Position : 540929 - 543247 bp Length : 2319 bp Strand : - Note : COG0542 ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGTTCGAGAGGTTCACCGACCGTGCGAGGCGTGTCGTTGTCCTGGCCCAGGAAGAGGCCCGGATGCTCAACCACAACTA CATCGGTACCGAGCACATCCTGCTGGGGCTGATTCATGAGGGTGAGGGTGTCGCGGCCAAGTCGCTGGAGTCGCTCGGGA TTTCGCTCGAGGGGGTGCGTAGCCAGGTGGAGGAGATCATCGGGCAGGGTCAGCAGGCTCCGTCTGGTCATATTCCGTTC ACCCCGCGGGCGAAGAAGGTTTTGGAGCTGAGTCTGCGGGAGGCGTTGCAGCTGGGTCATAACTACATCGGTACCGAGCA TATTTTGCTGGGTCTCATCCGTGAGGGTGAGGGTGTGGCGGCGCAGGTGCTGGTCAAGCTGGGTGCTGATTTGAATCGGG TGCGTCAGCAGGTGATCCAGTTGTTGTCGGGGTATCAGGGTAAGGAGCCGGTGGAGTCGGGTTCGCGGGGTGAGGCGGGT ACGCCGTCGACGTCGCTGGTGCTCGATCAGTTCGGCCGTAACCTGACTCAGGCGGCGTTGGAGGGCAAGCTGGATCCGGT GATCGGGCGCTCGAAGGAGATCGAGCGGGTGATGCAGGTGTTGAGCCGGCGCACCAAGAACAATCCGGTGTTGATCGGTG AGCCCGGTGTGGGTAAGACCGCGGTGGTGGAGGGTTTGGCGCAGGCGATCGTCAATGGTGAGGTGCCTGAGACGCTCAAG GACAAGCAGCTCTACACCTTGGATCTGGGTTCGCTGGTGGCGGGTAGTCGTTACCGTGGTGATTTCGAGGAGCGTTTGAA GAAGGTCCTCAAGGAGATCAACACGCGTGGTGACATCATCTTGTTCATCGATGAGCTGCACACGTTGGTGGGTGCCGGTG CTGCCGAGGGTGCGATCGATGCGGCCTCGATTTTGAAGCCGAAGCTGGCGCGTGGTGAGTTGCAGACCATCGGTGCGACG ACGCTGGATGAGTATCGTAAGTACATCGAGAAGGACGCGGCGTTGGAGCGGCGGTTCCAGCCGGTGCAGGTCGGTGAGCC CACGGTGGAGCACACGATCAACATTCTCAAGGGTTTGCGGGATCGGTATGAGGCTCATCATCGGGTGTCGATCACCGATG GTGCGCTGGTGGCCGCGGCGACGCTGGCGGATCGGTATATCAATGATCGGTTCTTGCCGGACAAGGCGATCGATTTGATC GATGAGGCGGGTGCGCGGATGCGGATCCGCCGGATGACCGCGCCGCCGGATCTGCGGGAGTTCGACGACAAGATCGCGGA TGCGCGCCGGGAGAAGGAGTCCGCGATCGATGCGCAGGACTTCGAGAAGGCTGCCCGGTTGCGGGACAAGGAAAAGCAGC TCGTCGCCAAGCGGGCCGAGCGGGAAAAGCAGTGGCGTTCCGGTGATCTGGATGTGGTCGCCGAGGTCGATGACGAGCAG ATCGCCGAGGTGTTGGCGAACTGGACCGGTATTCCGGTGTTCAAGCTGACCGAGGAGGAGACCACCCGGTTGCTGCGGAT GGAAGATGAGCTGCACAAGCGGATCATCGGCCAGGAAGACGCGGTCAAGGCGGTGTCGAAGGCGATCCGGCGTACGCGGG CGGGGTTGAAGGACCCGAAGCGCCCGTCGGGGTCGTTCATCTTCGCCGGTCCTTCGGGTGTGGGTAAGACCGAGTTGTCC AAGGCGCTGGCGAACTTCTTGTTCGGTGATGACGACGCGCTCATCCAGATCGATATGGGCGAGTTCCATGACCGGTTCAC CGCATCGCGGCTCTTCGGTGCTCCTCCCGGCTATGTCGGGTACGAGGAGGGTGGTCAGCTCACCGAGAAGGTGCGGCGCA AGCCGTTCTCGGTGGTGTTGTTCGACGAGATCGAGAAGGCACACCAGGAGATCTACAACACCCTGTTGCAGGTCCTCGAA GACGGCCGGCTCACCGACGGTCAGGGACGCACGGTCGATTTCAAGAACACCGTGCTGATCTTCACCTCGAACCTGGGCAC CTCCGATATCTCCAAAGCGGTCGGGTTGGGCTTCACCCAGTCCAACGCCGAGGGCTCGAACTACGAGCGGATGAAACTCA AGGTCAACGACGAACTCAAGAAACACTTCCGCCCTGAGTTCCTCAACCGCATCGACGACGTCATCGTCTTCCACCAGCTC ACCACCGACCAGATCGTGCAGATGGTCGACCTGATGATCGGCCGCGTCGCCAAACAGCTGAAGAACAAGGACATGGTCCC TCACTCTCCTGCTTCCGACATTCTGGCAACAGACGCCGCAGTGTGCTGTGTAACAACCGTGGGCGTCAGCCTGCCATGA Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQAPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKEPVESGSRGEAG TPSTSLVLDQFGRNLTQAALEGKLDPVIGRSKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLK DKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGAT TLDEYRKYIEKDAALERRFQPVQVGEPTVEHTINILKGLRDRYEAHHRVSITDGALVAAATLADRYINDRFLPDKAIDLI DEAGARMRIRRMTAPPDLREFDDKIADARREKESAIDAQDFEKAARLRDKEKQLVAKRAEREKQWRSGDLDVVAEVDDEQ IAEVLANWTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS KALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLE DGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKAVGLGFTQSNAEGSNYERMKLKVNDELKKHFRPEFLNRIDDVIVFHQL TTDQIVQMVDLMIGRVAKQLKNKDMVPHSPASDILATDAAVCCVTTVGVSLP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 83 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| O3I_002340 | YP_006805405.1 | Clp protease | VFG0079 | Protein | 0.0 | 62 |
| O3I_002340 | YP_006805405.1 | Clp protease | VFG0080 | Protein | 3e-136 | 52 |
