|
Name : lysS (O3I_002280) Accession : YP_006805393.1 Strain : Nocardia brasiliensis HUJEG-1 Genome accession: NC_018681 Putative virulence/resistance : Unknown Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 521724 - 523223 bp Length : 1500 bp Strand : + Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : GTGGCCCCCGAGGCCGACGATGCCCCCGAGCAGATCCGGATTCGCAAGGAGAAGCGGGAACGGTTGCTCGCGGCCGGCGG TGACGCGTATCCCGTGGTGGTGCCGCGGACGCATACCCTCGCCGAAATTCGCGCCGCATATCCCGATCTCGCCGCCGACA CCCAGACCGGTCTGCAGGCCGGTGTCGCCGGACGCGTCATATTCATGCGCAATACCGGCAAACTGTGTTTCGCGACGCTG CAGGAGGGCGACGGCACCAAGTTGCAGGCGATGATCAGCCTGAACGGCGTCGGCGCGGACGCGCTGGCGGCCTGGAAGGC CGATGTGGACCTCGGTGACTTCGTTTTCGTGCACGGCGAGGTGATCTCCTCGCGAACCGGTGAATTGAGCGTCATGGCCG ATTCCTGGTTCATGGCCGCCAAGTCGCTGCGACCGTTGCCGGTGGCGCACAAGGAGATGAACGAGGAGTCGCGGGTCCGG CAGCGCTATGTCGATCTGATCGTGCGACCCGAGGCCCGGGAAATGGCGCGCACCCGGATCGCGGTGGTGCGCGCGCTGCG TAACGCGCTCGAGCGCCGCGGTTTCCTCGAGGTGGAGACGCCGATGCTGCAGACGCTGCACGGCGGCGCGGCGGCCCGGC CGTTCGTCACCCATTCCAATGCCTTGGATATCGATCTCTACCTGCGTATCGCGCCGGAACTGTTCCTGAAGCGCTGTGTG GTCGGCGGACTCGAGCAGGTCTTCGAGATCAACCGGAACTTCCGCAACGAGGGTTCGGACTCCACGCATTCCCCCGAGTT CGCGATGCTGGAAACGTACCAGGCGTACGGAACCTACGACGACTCCGCGCGGATGACCCGGGAATTGGTACAGGAAGTCG CCCAGGAGGTGTTCGGCACCCAGGTAGTGACCCTCGCCGACGGCACCGAATACGACCTGCGCGGTGAGTGGGCGACGGTG GAGATGTACCCGTCTCTCTCGGACGCCCTCGGCGTCTCCGTGACACCGGAAACTTCGATAGCCGAATTACGCGCGCTTGC CGATCGGGTCGGTCTGGAAATTCCCGAGGGCAAGGGCTATGGGCACGGCAAACTTGTCGAGGAACTGTGGGAACACCAGT ACGGCGACAAGCTGTACGCGCCGACTTTCGTGCGTGACTTCCCGGTGGAGACATCACCGCTCACCAGGCAACATCGGTCC GCTGCGGGCGTCACCGAGAAGTGGGATCTGTATGTCCGTGGCTTCGAGTTGGCTACTGGCTATTCGGAGTTGGTGGATCC GGTGATCCAGCGCGAGCGCTTCGTGGATCAAGCCCGGCTGGCCGCCCAGGGCGACGACGAGGCCATGGCCTTGGACGAGG ACTTCCTTGCCGCGATGGAGCACGGCATGCCGCCGACCACTGGTACCGGTATGGGAATCGATCGTCTCTTGATGGCGTTG ACGGGTCTCGGAATCCGGGAAACAATACTGTTCCCAATTGTGCGACCGGTCACTCGCTGA Protein sequence : MAPEADDAPEQIRIRKEKRERLLAAGGDAYPVVVPRTHTLAEIRAAYPDLAADTQTGLQAGVAGRVIFMRNTGKLCFATL QEGDGTKLQAMISLNGVGADALAAWKADVDLGDFVFVHGEVISSRTGELSVMADSWFMAAKSLRPLPVAHKEMNEESRVR QRYVDLIVRPEAREMARTRIAVVRALRNALERRGFLEVETPMLQTLHGGAAARPFVTHSNALDIDLYLRIAPELFLKRCV VGGLEQVFEINRNFRNEGSDSTHSPEFAMLETYQAYGTYDDSARMTRELVQEVAQEVFGTQVVTLADGTEYDLRGEWATV EMYPSLSDALGVSVTPETSIAELRALADRVGLEIPEGKGYGHGKLVEELWEHQYGDKLYAPTFVRDFPVETSPLTRQHRS AAGVTEKWDLYVRGFELATGYSELVDPVIQRERFVDQARLAAQGDDEAMALDEDFLAAMEHGMPPTTGTGMGIDRLLMAL TGLGIRETILFPIVRPVTR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 8e-163 | 68 |
