Gene Information

Name : O3I_019595 (O3I_019595)
Accession : YP_006808852.1
Strain : Nocardia brasiliensis HUJEG-1
Genome accession: NC_018681
Putative virulence/resistance : Virulence
Product : iron-Fe(3+)siderophore transporter subunit, ATP-binding component of ABC superfamily protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4400269 - 4401144 bp
Length : 876 bp
Strand : -
Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence : 
ATGACCACAGAAGCCGCGGACGGCAGGCAGCCGGCGCCGACTCGGCTCGCCACCGTCGATGTCAGCCTCGGCTACGGCGA
CCGGGTGATCGTCGACGGACTCACCCTCGATATCGCTCCCGGCGTGATCACCACCGTGATCGGCCCGAACGGGTGCGGCA
AGTCGACCCTGCTGCGTTCGCTCGGCCGGCTGCTGCGTCCGCAGCAGGGCCGAGTGCTGTTGGACGGCAAGGCCATTTCC
ACGATGAAGACCAAGGATGTGGCGCGGGTGATCGGCATGCTGCCGCAGTCGCCGATCGCGCCGGAGGGCCTCACCGTCGC
CGATCTCGTCGCGCGCGGCCGGCATCCGCACCAGTCCTGGTTCCGGCAGTGGTCAGTGGACGACGAGGCCGAGGTGATGA
CCGCGCTGGAGCAGACCGGCATCGCCGATCTCGCCGATCGCGCGCTCGACGAGTTGTCCGGCGGCCAGCGCCAGCGCGCG
TGGATCTCGATGGCGCTCGCGCAGGGCACCGACATCCTGCTGCTCGACGAGCCGACCACCTATCTCGACCTCGCGCATGC
GGTGGACGTGCTCGACCTGGTCGACCGGCTGCATGCCGAGCTGGGCCGCACGGTGGTGATGGTGCTGCACGATCTCAACC
TGGCGATCCGCTACAGCGACGAGCTGATCGTCATGCGCGACGGCCGGATCGTCGCGCAGGGCCGTCCCGCCGACATCATC
GACGTGCAGTTGCTGCGCGAAGTCTTCGATCTGGATGCCTCGGTGCTGCAGGATCCGGTATCGGGGCGGCCCATGATCGT
GCCGATCGGCACCCGGCATGTGGTGGGTAAAGCAGGTGGCCCTGCTATGTCCAAATCCGCCGCATATGACAAATGA

Protein sequence : 
MTTEAADGRQPAPTRLATVDVSLGYGDRVIVDGLTLDIAPGVITTVIGPNGCGKSTLLRSLGRLLRPQQGRVLLDGKAIS
TMKTKDVARVIGMLPQSPIAPEGLTVADLVARGRHPHQSWFRQWSVDDEAEVMTALEQTGIADLADRALDELSGGQRQRA
WISMALAQGTDILLLDEPTTYLDLAHAVDVLDLVDRLHAELGRTVVMVLHDLNLAIRYSDELIVMRDGRIVAQGRPADII
DVQLLREVFDLDASVLQDPVSGRPMIVPIGTRHVVGKAGGPAMSKSAAYDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-57 58
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-44 49
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-51 48
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-51 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-48 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-48 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-48 47
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-48 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-38 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3I_019595 YP_006808852.1 iron-Fe(3+)siderophore transporter subunit, ATP-binding component of ABC superfamily protein BAC0164 Protein 2e-44 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3I_019595 YP_006808852.1 iron-Fe(3+)siderophore transporter subunit, ATP-binding component of ABC superfamily protein VFG0925 Protein 1e-50 51
O3I_019595 YP_006808852.1 iron-Fe(3+)siderophore transporter subunit, ATP-binding component of ABC superfamily protein VFG1042 Protein 2e-44 49