Gene Information

Name : O3I_014150 (O3I_014150)
Accession : YP_006807765.1
Strain : Nocardia brasiliensis HUJEG-1
Genome accession: NC_018681
Putative virulence/resistance : Virulence
Product : dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3158971 - 3160494 bp
Length : 1524 bp
Strand : +
Note : COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGACCGTCTACGCCCGGCCCGGCGCACCGGATGCCCTGATGAGTTACCAATCCCGCTACGACAATTGGATCGGCGGCCA
GTGGGTGGCACCGGTCAAGGGGCAGTATTTCGAGAATCCGACCCCGGTCACCGGTGAGAACTTCTGTGAGGTGGCGCGTT
CCACCGCAGAGGACATCGAACTCGCGCTCGACGCGGCGCACGCCGCCGCCCCGGCGTGGGGCAAGACCTCGGCGGCCGAG
CGCGCGGCGATCCTGAACAAGATCGCCGACCGGATCGAGGAGAACCTGGACGCGATCGCCCTGGCCGAGGCGTGGGACAA
CGGCAAGCCGATCCGCGAGACGCTGGCCGCCGACATCCCGCTGGCGGTCGACCACTTCCGCTACTTCGCGGGAGCCATTC
GCGCGCAAGAGGGTTCGCTGTCGGAGATCGATGCCGAGACCGTCGCCTACCACTTCCACGAGCCGCTCGGCGTGGTCGGT
CAGATCATCCCGTGGAACTTCCCGATCCTGATGGCGACCTGGAAGCTGGCCCCCGCGCTGGCCGCGGGCAATGCGGTGGT
GCTCAAGCCGGCCGAGCAGACCCCGGCCTCGATCATGTTCCTGTGGAGCATCATCGGCGATCTGCTGCCGCCCGGCGTGA
TCAATATCGTCAACGGCTTCGGTGTCGAGGCGGGCAAGCCGCTGGCCTCCAGCAACCGGATCGCGAAGATCGCGTTCACC
GGCGAGACCACCACCGGCCGGCTCATCATGCAGTACGCGTCGCAGAACCTGATCCCCGTGACGCTCGAACTCGGCGGCAA
GAGCCCGAACATCTTCTTCTCCGATGTCATGGGCGCCGACGACGACTTCCTGGACAAGGCCCTGGAAGGCTTCACGATGT
TCGCGCTGAACCAGGGCGAGGTGTGCACCTGCCCGTCGCGCTCGCTGATCCAGGCCGATATCTTCGATCGCTTCCTCGAG
CTGGCCGCGCTGCGGACCAAGGCGGTGCGCCAGGGCGATCCGCTCGACTCGGAGACCATGATCGGCGCGCAGGCGTCCAA
CGACCAGCTGGAAAAGGTGTTGTCCTACATCGAGATCGGCAAGGGCGAGGGCGCGCAGCTGGTCACCGGTGGCGAACGCG
CGCTGCTGGGCGGTGATCTGAACGGCGGCTACTACGTGCAGCCGACGATCTTCACCGGCCGCAACGCGATGCGGATCTTC
CAGGAGGAGATCTTCGGACCGGTGGTGTCGGTGACCTCGTTCACCGACTACGACGACGCCATCTCGATCGCCAACGACAC
CCTGTACGGTCTCGGCGCGGGGGTGTGGTCGCGCGACGGCGGCACCGCGTACCGGGCGGGCCGTGATATCCAGGCGGGCC
GGGTGTGGACCAACACCTATCACCAGTATCCGGCGCACGCGGCGTTCGGCGGCTACAAGCAGTCCGGGGTCGGCCGGGAG
AATCACAAGATGATGCTCGACCACTACCAGCAGACCAAGAACCTGCTGGTCAGTTACGCGCCGAAGGCCATGGGATTCTT
CTGA

Protein sequence :
MTVYARPGAPDALMSYQSRYDNWIGGQWVAPVKGQYFENPTPVTGENFCEVARSTAEDIELALDAAHAAAPAWGKTSAAE
RAAILNKIADRIEENLDAIALAEAWDNGKPIRETLAADIPLAVDHFRYFAGAIRAQEGSLSEIDAETVAYHFHEPLGVVG
QIIPWNFPILMATWKLAPALAAGNAVVLKPAEQTPASIMFLWSIIGDLLPPGVINIVNGFGVEAGKPLASSNRIAKIAFT
GETTTGRLIMQYASQNLIPVTLELGGKSPNIFFSDVMGADDDFLDKALEGFTMFALNQGEVCTCPSRSLIQADIFDRFLE
LAALRTKAVRQGDPLDSETMIGAQASNDQLEKVLSYIEIGKGEGAQLVTGGERALLGGDLNGGYYVQPTIFTGRNAMRIF
QEEIFGPVVSVTSFTDYDDAISIANDTLYGLGAGVWSRDGGTAYRAGRDIQAGRVWTNTYHQYPAHAAFGGYKQSGVGRE
NHKMMLDHYQQTKNLLVSYAPKAMGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-146 61
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-152 60
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-152 60
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-152 60
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-151 60
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 6e-68 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3I_014150 YP_006807765.1 dehydrogenase VFG0082 Protein 4e-146 61