Gene Information

Name : O3I_006440 (O3I_006440)
Accession : YP_006806225.1
Strain : Nocardia brasiliensis HUJEG-1
Genome accession: NC_018681
Putative virulence/resistance : Unknown
Product : ATP-dependent helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1482345 - 1484390 bp
Length : 2046 bp
Strand : -
Note : COG1199 Rad3-related DNA helicases

DNA sequence :
GTGCCCGAACTGCCGCCCGTACCCGACCTTTTGGCCACCGCTGTGCAGGCGCTCGGCGGAAAAGAGCGTGTCGGACAGCT
GACCATGGCGACCGCCGTGGACCACGCCATCGACACCAAGGAGCACCTGGCGGTGCAGGCGGGCACGGGCACCGGCAAAT
CGCTGGCCTATCTGGTGCCGAGCCTGCGTCACGCGGTGCGCACCGGGCGCACGGTGGTGGTGTCGACCGCGACGATCGCG
CTGCAGCGCCAGCTCGTCGACCGGGACCTGCCGCGGCTGTCCGAGGCGCTCAGCAAGCCGCTCGGGCGCGCGGCGAAGTT
CGCGATCCTCAAGGGCCGCAACAACTATCTGTGCTTGAACAAGATCAACAGCGTGATCCCGGACGAGCCCGCCGAGGCCG
AACTGTTCGACGCGTTCGCGATCTCCCGGCTCGGGCGCGAGGTGCAGCGGCTCAACGAGTGGGCCTCCGATACCGAGACC
GGCGACCGCGACGAGCTGGTGCCCGGCGTCACCGACCGCGCCTGGCGGCAGGTGAGCGTCTCCTCGCGCGAATGCCTCGG
CAAATCGCGCTGCCCGTTCGGGCAGGACTGCTTCGCCGAACGAGCCAGGGCCGAGTCGGCGCAGGCCGATGTGGTGGTGA
CCAATCACGCCCTGCTCGCCATCGACGCGATCAGCGGCATCCAGGTGCTGCCCGAACACGACGTCGTGGTCATCGACGAG
GCGCACGAGCTGGTCGATCGGGTCACCGGCGTGGCCACCGCGGAGCTGGCCTCCACCGCGATCAGCGCGGCCGCGCGCCG
CTGCGCCAAGCTCATCGACGAACAAGAGGTCGACCGCCTCGAAGGCGCGGCCGAAGCGTGGCACGAGGTGCTCGAAGAGC
TGCCCGCGGCCCGCTGGGAACAGCTGCCCAGCGGCGTCGCCCCGGTGCTCGCGCTCGTCCGCGACGCGGCGTGGAACGCG
CGCACCGCCCTCGCGCCGCAGGGCGGCACCACCCAACAGGGCGACCCGGAGTCCGCGGCCGCGCGCACCCAGGCGCTGGC
CGCCATCGACGAGGTGCACGACAGTGCCGTGCGCGCGCTCACCGCGTTCGACGAGCCCGACCCGGCGAACCGGCGCGACG
TCATCTGGCTGTCCGCCGACGAGATGCGCGGGGTCACCCGGCGCTCGCTGCGGATGGCGCCGCTCTCGGTGGGCGGGCTG
TTGCGCAGCAGGCTGTTCGGCACCGCCACCGTCGTGCTGACCTCGGCCACGCTGCAGATCGGCGGCTCGTTCGACGGACT
GGCCATCACCTGGGGCCTGCCCGCGCAGACGCCCGGGCGCGCCGATCCCGGCACGGCGAACGGGGCCGTCGCGCCCGCCG
ACATCGAGCAGGTGCGCTGGAGTTCGCTCGACGTCGGCTCGCCGTTCGATCACGCCAAATCGGGCATTCTGTATGTCGCC
AAACATCTTCCGGCGCCGGGTCGCGACGGACTCGCGCCCGCCTACCTGGACGAGATCGAAAAGCTCATCACGGCCGCGGG
CGGGCGCACCCTCGGCCTGTTCTCCTCCATGCGCGCGGCCAAGGCGGCCACCGAGACGTTGCGCGAACGGCTGGACACAC
CGGTCCTGTGCCAAGGCGACGATTCGACCGGCGCGCTGGTGCGCAAGTTCGCCGACGATCCGGAGACCTCCCTGTTCGGC
ACGCTGTCGCTGTGGCAGGGCGTCGACGTGCCGGGTCCGTCGCTGAGTCTGGTGATCCTGGACCGGATTCCGTTCCCCCG
CCCCGACGATCCCCTGCTCACCGCGCGACAGCGGGCGGTGGAATCGCGCGGCGGCAACGGGTTCATGGCGGTCGCGGCCA
ATCACGCGGCGCTGCTGCTCGCACAGGGCACCGGGCGATTGCTGCGCAGTGTCGACGACCGCGGCGTGGTCGCGATCTTG
GACTCGCGACTGGCCACCGCCCGCTACGGCGGCTATCTGCGCGCCTCGCTGCCGCCGTATTGGGAGACCGCCGACCCCGA
GGTCGTAGTCAAAGCGTTGAAACGGCTCACCGCGAACGCCGTGTGA

Protein sequence :
MPELPPVPDLLATAVQALGGKERVGQLTMATAVDHAIDTKEHLAVQAGTGTGKSLAYLVPSLRHAVRTGRTVVVSTATIA
LQRQLVDRDLPRLSEALSKPLGRAAKFAILKGRNNYLCLNKINSVIPDEPAEAELFDAFAISRLGREVQRLNEWASDTET
GDRDELVPGVTDRAWRQVSVSSRECLGKSRCPFGQDCFAERARAESAQADVVVTNHALLAIDAISGIQVLPEHDVVVIDE
AHELVDRVTGVATAELASTAISAAARRCAKLIDEQEVDRLEGAAEAWHEVLEELPAARWEQLPSGVAPVLALVRDAAWNA
RTALAPQGGTTQQGDPESAAARTQALAAIDEVHDSAVRALTAFDEPDPANRRDVIWLSADEMRGVTRRSLRMAPLSVGGL
LRSRLFGTATVVLTSATLQIGGSFDGLAITWGLPAQTPGRADPGTANGAVAPADIEQVRWSSLDVGSPFDHAKSGILYVA
KHLPAPGRDGLAPAYLDEIEKLITAAGGRTLGLFSSMRAAKAATETLRERLDTPVLCQGDDSTGALVRKFADDPETSLFG
TLSLWQGVDVPGPSLSLVILDRIPFPRPDDPLLTARQRAVESRGGNGFMAVAANHAALLLAQGTGRLLRSVDDRGVVAIL
DSRLATARYGGYLRASLPPYWETADPEVVVKALKRLTANAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1474 YP_001800868.1 ATP-dependent DNA helicase Not tested Not named Protein 1e-155 54