Gene Information

Name : O3I_005615 (O3I_005615)
Accession : YP_006806060.1
Strain : Nocardia brasiliensis HUJEG-1
Genome accession: NC_018681
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1304364 - 1305074 bp
Length : 711 bp
Strand : +
Note : COG1131 ABC-type multidrug transport system, ATPase component

DNA sequence :
GTGTCGGCGTTGGAAGTCTCGCAACTGCACAAGCATTACGGAAAACATCGCGCGCTCGACGGCGTGGAGCTGTCGGTCCG
AACGGGCGAGGTCTATGGTCTGCTCGGCCCCAACGGCGCAGGCAAGTCCACCCTGATGAAGACCGTGCTGGGGCTGCAGC
GGCCGACCAGCGGACACATCCAACTGTTCGGCCGGCCCTACCACCGGGCGCAGTTGGTCGATGTCGGCGCGCTGATCGAG
ACTCCAGGACTGTGGCCGAAGCTGGACGCACTGACCCATCTACGCATCCACGCGAAGCTGCGCGGCGTGCCCGAGGCCTG
GATCGATGAGGCGCTGGCCGTGGTGCAACTGAACGACGTGCGGGATCGCAAGATTCAAGCCTTCTCGCTCGGTATGCGCT
GGCGGCTCGGCATCGCCATCGCATTACTCGCGCGACCGAAGTTGTTGCTGCTCGACGAGCCGACCAACGGACTCGACCCG
GTGGGCATCCGGGAGATGCGCGGGATCATCCGTTCGCTCGCTGCCAACGGCACCACGGTGTTTATTTCCAGTCACCAGCT
GTCCGAGATCGCGCAGGTGTGTGACCGAGTTGCGGTGCTGGTAGCGGGAAAAACCCGCTACGAGGGAACGCTGGAGGGCA
TCGCGGGCGACGGTGATCTCGAAGCAGGATTCTTCCGCATCCTCGAATCCTGTGATTCGCGTATTCGCTGA

Protein sequence :
MSALEVSQLHKHYGKHRALDGVELSVRTGEVYGLLGPNGAGKSTLMKTVLGLQRPTSGHIQLFGRPYHRAQLVDVGALIE
TPGLWPKLDALTHLRIHAKLRGVPEAWIDEALAVVQLNDVRDRKIQAFSLGMRWRLGIAIALLARPKLLLLDEPTNGLDP
VGIREMRGIIRSLAANGTTVFISSHQLSEIAQVCDRVAVLVAGKTRYEGTLEGIAGDGDLEAGFFRILESCDSRIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd4 CAA63569.1 - Not tested PaLoc Protein 5e-36 43
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 5e-28 42
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 5e-28 42
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 5e-28 42
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 5e-37 42
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 3e-37 42
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 5e-28 42
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 3e-25 42
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 3e-25 42
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 4e-35 42