Gene Information

Name : AMBAS45_04470 (AMBAS45_04470)
Accession : YP_006801853.1
Strain : Alteromonas macleodii Balearic Sea AD45
Genome accession: NC_018679
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1046199 - 1048820 bp
Length : 2622 bp
Strand : -
Note : COG0249 Mismatch repair ATPase (MutS family)

DNA sequence :
ATGATGCGCCAATACCTGACTATTAAGGCGCAGCATCCGAATATTTTACTGTTTTATCGCATGGGCGACTTTTATGAGTT
GTTTTACGACGATGCAAAAAAAGCTGCTGAATTACTGGATATTTCATTAACAGCCAGAGGAAAATCTGGTGGTGAACCTA
TTCCTATGGCTGGTGTGCCTTATCATGCGGTAGAAAGCTATCTGTCACGCTTAGTGAAAATGGGCGAGTCAGTAGCCATT
TGTGAACAGGTAGGCGACCCAGCCACCAGTAAAGGCCCAGTTGAACGCGCAGTACAACGCATTGTTACGCCCGGTACAGT
CACCGACGAAGCGCTGTTAGAAGAACGTCGCGACAATATTCTGGCCGCCGTTTGTGGTCACAGTATGCACTATGGGCTGG
CAACCCTAGATGTTACAAGCGGTCGTTTTGTTGTGTTTGAATGTGACAGCGATGAAAGCCTACTTGCTGAAATTCAGCGC
ATTAACCCAGCTGAACTACTCTATCCTGAAGGATTTGAAAGCTTAGCATTGGTTGAAAACCGCAAAGGACTTAGACGCCG
TCCTGAATGGGAATTCGACATTGATACCGCCACAGAGCAATTAAACGCACAGTTTGAAACCAAAACATTAGATGGCTTTG
GAATAAAAGGCGTCACTAAAGGCTTAGGCGCGGCGGGCTGCGTTTTACAATATGTAAAGGATACCCAGCGTACTGCTCTG
CCTCACATTCGCCGCATTCAGACCGAACAGCAAGACAGCCGCGTTCAGCTTGATGCTGCCACCCGCAGAAACCTAGAACT
TACCCATAATTTGTCGGGCGGGCAGGAAAATACGCTGTTCAGCGTGATGGATACCACCACTACGGCCATGGGTAGTCGTA
TGCTACAGCGTGTTATTCACTCGCCTTTAACTGATCAGCATGAACTGCACAGCCGCTTAGATGCTGTTGAAACGTTTATT
AATGATGACCCTGAAGATATTCGCACCGCGTTAAAGCACATTGGTGATATAGAACGTATTATGGCGCGCTTAGCCCTTCG
TTCAGCGCGGCCACGGGACTTTGCTCGCCTAAAAAATGCGTTTAATGCGCTGCCTGACTTACAAGATGCCTTAGCGCGGT
TCGACACAGGCCAAATCAGAAGTATTAGCGAAACCATTGGCACTTACCCTGAGCTTCAAGCCCTGTTAAATGATGCCATT
ATTGATAACCCGCCAGTGGTAATACGCGATGGCGGCGTGATTGCCGAGGGCTACAACGCCGAACTTGATGAATTGCGTAA
GCTATCACAAGGAGCTACCGACTACTTAGACGCTATGGAACAACGTGAGCGCGAGCGCACCGGCATTTCTACGCTAAAAG
TGGGCTATAACAAAGTTCACGGGTTCTTTATTGAAATTAGCCGGGCCAACAGTGCATTAGCGCCTGCTGAATATATTCGA
AGACAAACCCTTAAAAACACTGAACGTTATATAACGCCAGAACTTAAAGAGCACGAAGATAAAGTGCTAAGCAGTCAGGG
TGCTGCACTTGCTCTTGAAAAGCAGCTTTACGAAGCCTTATTCGACAACTTTGCGCCACACTTAAACAACTTAATTGAAA
CTGCCGCGGCGCTAGCCAAACTCGACGTGCTGTGCTGTTTTGCCGAACGCGCAGTCTCCCTTGATTGGTATCGACCTCAT
TTGAGTCAAGAATGTGCGCTTACTTATGATGCCGGCCGCCACCCTGTGGTTGAGAATGTAATGAAAGACCCCTTCATTGC
CAACCCGCTACAGCTAGATACCGAGCGCCGCATGCTAATTATTACTGGCCCGAACATGGGCGGTAAATCAACCTATATGC
GCCAAACCGCGCTGATTGCCCTGTTGGCCTGTATTGGCAGTTTTGTACCTGCAGAAAATGCCCACATAGGAAAGCTTGAT
CGCATCTTTACCCGTATAGGCGCATCAGATGACTTAGCCTCAGGTCGTTCTACCTTTATGGTTGAGATGACAGAGACGGC
GAACATTCTAAACAATGCCACAGAAAACTCGCTGGTATTGATGGATGAAATAGGCCGTGGCACCAGTACCTATGATGGAT
TGTCTCTGGCGTGGGCATGCGCGAGTTATTTGGCAAAACAGCTAAATGCTTATACGCTTTTTGCCACGCATTATTTCGAA
CTTACTGAACTTCCAGAAACGCAAAGCGGCGTAGTGAATGTGCACTTAGATGCGATGGAGTTTGAAGATACCATACGCTT
CATGCATACCGTATCAGAAGGCGCGGCGAGCAAAAGCTTTGGTTTACAAGTTGCCCAACTTGCAGGCGTACCTAAGGCGG
TAATAAAAGCGGCGCAACAGAAGCTTGCGGTGTTGGAATCATCACACCTTATGACCAGCACGGAAGATGGAGCAGAGAAA
GCCAACGATGAGGCTTTTGTAGCGAAGAGCTCGGTAAAAGGTGCAAATAAAACAAGCGCATCAGTTAAAGCTACACCAAA
TACCAAAGGCCAAGCTGAAATGCTGTTCCCTGATAAGCCGCACCCGGTAGTAGAAGCCCTTGAAAACTTGTCACCCGATG
AGCTATCACCGCGCCAAGCGCTAGACCTTATCTACACACTTAAGCGTCTAAGCCAGTCTTAA

Protein sequence :
MMRQYLTIKAQHPNILLFYRMGDFYELFYDDAKKAAELLDISLTARGKSGGEPIPMAGVPYHAVESYLSRLVKMGESVAI
CEQVGDPATSKGPVERAVQRIVTPGTVTDEALLEERRDNILAAVCGHSMHYGLATLDVTSGRFVVFECDSDESLLAEIQR
INPAELLYPEGFESLALVENRKGLRRRPEWEFDIDTATEQLNAQFETKTLDGFGIKGVTKGLGAAGCVLQYVKDTQRTAL
PHIRRIQTEQQDSRVQLDAATRRNLELTHNLSGGQENTLFSVMDTTTTAMGSRMLQRVIHSPLTDQHELHSRLDAVETFI
NDDPEDIRTALKHIGDIERIMARLALRSARPRDFARLKNAFNALPDLQDALARFDTGQIRSISETIGTYPELQALLNDAI
IDNPPVVIRDGGVIAEGYNAELDELRKLSQGATDYLDAMEQRERERTGISTLKVGYNKVHGFFIEISRANSALAPAEYIR
RQTLKNTERYITPELKEHEDKVLSSQGAALALEKQLYEALFDNFAPHLNNLIETAAALAKLDVLCCFAERAVSLDWYRPH
LSQECALTYDAGRHPVVENVMKDPFIANPLQLDTERRMLIITGPNMGGKSTYMRQTALIALLACIGSFVPAENAHIGKLD
RIFTRIGASDDLASGRSTFMVEMTETANILNNATENSLVLMDEIGRGTSTYDGLSLAWACASYLAKQLNAYTLFATHYFE
LTELPETQSGVVNVHLDAMEFEDTIRFMHTVSEGAASKSFGLQVAQLAGVPKAVIKAAQQKLAVLESSHLMTSTEDGAEK
ANDEAFVAKSSVKGANKTSASVKATPNTKGQAEMLFPDKPHPVVEALENLSPDELSPRQALDLIYTLKRLSQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMBAS45_04470 YP_006801853.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 63