Gene Information

Name : AMBAS45_19175 (AMBAS45_19175)
Accession : YP_006804771.1
Strain : Alteromonas macleodii Balearic Sea AD45
Genome accession: NC_018679
Putative virulence/resistance : Virulence
Product : type II secretory pathway, ATPase PulE-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4503969 - 4505534 bp
Length : 1566 bp
Strand : +
Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

DNA sequence :
ATGGCAGGGCAGGACGAACAGATTACTCAGGCATTAGAGGCACAAGAAGAAGCCTTGGAAGCCATGGGTGAAGACGCCGG
TTTGCCTGAAGAAGAGGCCGGTCCAAGACAGCTTTCTTTTAGCTTTGCAAAGCGTAATCAGGTGTTGCTGGAAACTAATG
AAACACCTGCGGTTTTGTATTTCACAGAGAATACACCGTTTGATGTATTTGCCGAAGTGCGACGCTTCTACGGCGAACCT
TTTGTTCCTAAAACTATTCCTGCCAATGAGTTTGAAAGCCTGCTTACCAGCGCCTTTCAGCGCGATAGCTCTGCGGCTAA
ACAACTTATGGAAGACCTTGGCAACGAAAGTGATTTGTTCGCTCTTGCTGAAGACTTGCCTGACACTGAAGACCTGTTAG
ACAGTGAAGACGATGCGCCTATCATCAAGCTTATCAACGCCATGTTGGGCGAAGCGATCAAAGAAGGTGCATCAGATATT
CACATTGAAACCTTTGAAAACCAGCTTGTGGTTCGTTTCAGGGTAGACGGCGTACTACGCGAAATTTTACGTCCTAACCG
CAAGCTGTCTTCCATGTTGGTGTCACGTATAAAAGTTATGGCGAAGTTAGACATTGCCGAAAAACGTGTGCCCCAGGATG
GTCGTATAACGTTGCGTATTGCAGGGCGAGCGGTGGATGTGCGTGTTTCTACTATGCCTTCAAGTCACGGCGAGCGCGTG
GTGCTGCGTCTATTGGATAAGAACAATGCGCGCTTAAATCTAGAAGATTTAGGCATGACGCTGCAAAACCGTAACCACTT
TTCATCTCTTATTCGAAAGCCTCACGGCATTATTTTGGTTACCGGTCCAACGGGCTCGGGTAAAAGTACCACCCTGTATG
CAGGGTTAACCGAGATAAACTCGCGAGACAGAAACATTTTAACCGTTGAAGATCCTATTGAGTTCGATCTTCCGGGCATC
GGACAGACACAGGTTAATCCCCGTGTAGACATGACTTTTGCCAGAGGCCTTCGCGCTATTTTGCGTCAAGACCCCGATGT
AGTGATGGTGGGTGAGATTCGTGATATCGAAACCGCACAAATTGCCGTTCAAGCCAGCTTAACCGGTCACTTAGTACTCT
CTACTCTGCATACCAATACGGCAGCAGGCGCGATCACCCGTTTAGAAGACATGGGTATTGAGCCATTTCTGTTGTCTTCG
AGCTTATTGGCCGTCTTATCACAGCGACTCGTTCGTACCCTGTGCCCAGATTGCAAAAAGCCACATACGCCTGACGCTTC
TGAGCTTGAAGTATTAGGGCAGAACGCCACAAGCGAGACCACCATCTACAAGCCCCATGGCTGCGCCGCGTGTAACCAAA
CCGGGTATCGCGGTCGTACCGGTATTCATGAGCTATTGTTGGTAGATGAAAAAGTGCGCGAGATGATGCACGAAGGTGTA
GGTGAGCAAGCCATTGAACGCTACATCAGAAAGACGACACCAAGCATTCGTGAAGACGGCTGTAGTAAAGTGCTGGCGGG
CGCTACCTCACTTGAAGAAGTGCTTCGAGTAACGAGGGAAGACTAA

Protein sequence :
MAGQDEQITQALEAQEEALEAMGEDAGLPEEEAGPRQLSFSFAKRNQVLLETNETPAVLYFTENTPFDVFAEVRRFYGEP
FVPKTIPANEFESLLTSAFQRDSSAAKQLMEDLGNESDLFALAEDLPDTEDLLDSEDDAPIIKLINAMLGEAIKEGASDI
HIETFENQLVVRFRVDGVLREILRPNRKLSSMLVSRIKVMAKLDIAEKRVPQDGRITLRIAGRAVDVRVSTMPSSHGERV
VLRLLDKNNARLNLEDLGMTLQNRNHFSSLIRKPHGIILVTGPTGSGKSTTLYAGLTEINSRDRNILTVEDPIEFDLPGI
GQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDIETAQIAVQASLTGHLVLSTLHTNTAAGAITRLEDMGIEPFLLSS
SLLAVLSQRLVRTLCPDCKKPHTPDASELEVLGQNATSETTIYKPHGCAACNQTGYRGRTGIHELLLVDEKVREMMHEGV
GEQAIERYIRKTTPSIREDGCSKVLAGATSLEEVLRVTRED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 6e-151 65
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-151 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMBAS45_19175 YP_006804771.1 type II secretory pathway, ATPase PulE-like protein VFG2048 Protein 8e-150 64
AMBAS45_19175 YP_006804771.1 type II secretory pathway, ATPase PulE-like protein VFG0182 Protein 7e-144 64
AMBAS45_19175 YP_006804771.1 type II secretory pathway, ATPase PulE-like protein VFG1876 Protein 6e-131 57
AMBAS45_19175 YP_006804771.1 type II secretory pathway, ATPase PulE-like protein VFG2426 Protein 5e-73 48
AMBAS45_19175 YP_006804771.1 type II secretory pathway, ATPase PulE-like protein VFG1880 Protein 6e-80 45