|
Name : AMBAS45_19170 (AMBAS45_19170) Accession : YP_006804770.1 Strain : Alteromonas macleodii Balearic Sea AD45 Genome accession: NC_018679 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : - COG ID : - EC number : - Position : 4501916 - 4503967 bp Length : 2052 bp Strand : + Note : COG1450 Type II secretory pathway, component PulD DNA sequence : ATGAAAAGGCGCACTAGCCAAAAACTATTATCTCGCTTGAGCACTGCCATGTGTACAGCGCTTCTGTGTTTCTCGGTGAC GGCCGCTGAGTACATGCCTAATTTCAAAGATACTGACATCAACGAGTTTATTAATATTGTTGGTAAAAATCTTGAGCGCA CCATTATTGTCGACCCTAACGTACGTGGAAAAATAAGCGTACGCAGCTATGACATGCTCGATGAAGATCAGTACTATCAG TTTTTCCTAAACGTACTACAAGTGTATGACTTCGCCGTTGTAGAAATGCCTAGCGGTATTTTGAAAGTGGTTCGCTCGAA AGACGCTAAAACATCCAATATTCCTGTTGTTGAAGGCGCTAATCGCGACGGCGATGAAATGATCACTCGCGTTGTACCTG TTTATAACGTACCGGTGCGCGAACTTGCACCTATTTTACGTCAGCTAAATGACCAGGCGGGCGGCGGTAACGTGGTTAGC CACGACCCATCGAACGTAATGATGCTCACCGGCCGTGCTGCGGTAGTTAACCGACTAGTAGAAATTATCGAGCGCGTGGA CCGCGCCGGTGACGAAGAAGTAGAAATCGTTAAACTTCGCTATGCGTCAGCATCAGAAATGGTGCGCATTATTGACAGCA TTAATAAGTCGCAAGGAAAAGCTAATACAGGAACTAAGTCGGAGCCTCGCGTTGTGGCAGACGACAGAACTAACTCGGTT ATTGTGAGCGGCGATATTAAAGCACGCCAGCGTCTTATCAACCTTATTCAGCGCATGGACCAAGAGCTTGAATCAAACGG CAACACCCGCGTGCTGTTTCTTAACTACGCTAAGGCGGAAGACTTAGTAAAAGTATTACAGGGCGTATCTGCTAGCATTC AAGCAGAAGAGCAAGGCGGTGGCACTACATCGCGCCGAGCGGGTTCAAACCGTGAAATCAGCATTGATGCACATGAAGAT TCTAACGCCATTGTTATTACCGCAGAGCCAGACATGATGCGCTCGTTAGAAGAGGTAGTACGTCAGCTTGATATTCGCCG TGCGCAGGTACAAGTTGAAGCCATTATCGTTGAAGTCTTTGAAGGCGACGGCACTACATTGGGTGTGCAGTGGGCTTCTG AAGCCGGCGGTGGTACACAGTTCAGCAACGGTGTTGTACCGGTTGGATCATTGGCGGTAGCCCTTAAGCAAGCAGAAGAC GATACCGATACCGAAGCCTATGTAACAGATGATGGCGAAGTGGTCACAGTTAATACCACCGATGAAGGCGATTACACCGC ACTAGCGAGCCTTTTAGGCGGCGCTAACGGCCTTATTGCCGGCGTTATCGAAAATGGCTGGGGCGCGGTAGTACAAGCAG TAAGCACCGACACCAATTCAAATATTCTTGCCACACCTCACCTAACTACAATGGATAACGAAGAAGCGTTTTTCATTGTA GGTCAGGAAGTGCCTATTATCACAGGCACAACGACAGGAGCGAACAACTCTAACCCTTTCCAAACCGTTGACCGCCAAGA AGTGGGTATCAAACTTAAAGTTACGCCACAAATCAACGAAGGCGACGCCGTACAGCTGCTTATCGAACAAGAAGTGTCTA GCGTAAGTGGCGCTACATCGGTAGATATTTCAATTAACAAGCGTGAAATTAAAACCACGGTGATCGTAGATGATGGCGGC ACTATTGTTCTTGGCGGTTTGATTGACGAAGACGTGCAAGAAAGTGAATCAAAAGTGCCGTTATTAGGTGACATTCCAAT ACTCGGTCACTTATTCAAATCGACATCAACCAGCAAGCGTAAGCGTAACTTGATGGTATTCTTAAAGCCGACTATCGTCC GCGACGGCGCAACAATGAACGCAATCAGCCATCGCAAATACAACTACATTCGCGCACTTCAGCTTAAACGCCAGCAAGAA GGTGTTTCGCTAATGCCTTATGAAGAGACGCCAAGCATTCCTCAATGGGATGACGCACTCGCTTTACCTCCTTCATTTGA AGAGTACCTCTCTGAGAAAGAGAAGCAGAAACAAGAAGAAGGTAACGACTAA Protein sequence : MKRRTSQKLLSRLSTAMCTALLCFSVTAAEYMPNFKDTDINEFINIVGKNLERTIIVDPNVRGKISVRSYDMLDEDQYYQ FFLNVLQVYDFAVVEMPSGILKVVRSKDAKTSNIPVVEGANRDGDEMITRVVPVYNVPVRELAPILRQLNDQAGGGNVVS HDPSNVMMLTGRAAVVNRLVEIIERVDRAGDEEVEIVKLRYASASEMVRIIDSINKSQGKANTGTKSEPRVVADDRTNSV IVSGDIKARQRLINLIQRMDQELESNGNTRVLFLNYAKAEDLVKVLQGVSASIQAEEQGGGTTSRRAGSNREISIDAHED SNAIVITAEPDMMRSLEEVVRQLDIRRAQVQVEAIIVEVFEGDGTTLGVQWASEAGGGTQFSNGVVPVGSLAVALKQAED DTDTEAYVTDDGEVVTVNTTDEGDYTALASLLGGANGLIAGVIENGWGAVVQAVSTDTNSNILATPHLTTMDNEEAFFIV GQEVPIITGTTTGANNSNPFQTVDRQEVGIKLKVTPQINEGDAVQLLIEQEVSSVSGATSVDISINKREIKTTVIVDDGG TIVLGGLIDEDVQESESKVPLLGDIPILGHLFKSTSTSKRKRNLMVFLKPTIVRDGATMNAISHRKYNYIRALQLKRQQE GVSLMPYEETPSIPQWDDALALPPSFEEYLSEKEKQKQEEGND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-152 | 53 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 1e-159 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| AMBAS45_19170 | YP_006804770.1 | general secretion pathway protein D | VFG2047 | Protein | 1e-149 | 53 |
