Gene Information

Name : AMBAS45_17060 (AMBAS45_17060)
Accession : YP_006804352.1
Strain : Alteromonas macleodii Balearic Sea AD45
Genome accession: NC_018679
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4019457 - 4020644 bp
Length : 1188 bp
Strand : -
Note : COG1004 Predicted UDP-glucose 6-dehydrogenase

DNA sequence :
ATGGATAGTACTATGCAGAAGCTCAAAATAGCTGTAGCAGGCACAGGCTATGTAGGGCTTTCAAATGCAGTGCTACTTGC
ACAACACAATGAAGTGAAAGCGGTCGACTTAGTACCTGAAAAGGTCGAGATGCTGAATAACAAAAAGTCTCCAATTGAAG
ACAAAGAGATCTCAGAGTACCTAACGACTAAAGAGCTTAATCTTGAAGCCACGTTAGATGCACAAGTTGCTTACAAAGAT
GCTGACTACGTTGTTATCGCTACGCCTACGGATTACGACCCGCAAACCAACTACTTCAATACAGGTAGTGTAGAAGCAGT
CATTAAAACAGTATTGGAAATTAATCCTAATGCAGTAATGATTGTAAAGTCTACGGTTCCCGTTGGCTTCACTCGTGATG
CAAAAGAGCGCTTTGGTTCTGACAACATTATTTTTTCTCCAGAGTTCTTACGTGAAGGTAAAGCGCTTTACGACAACCTT
TACCCAAGCCGCATCATTGTTGGAGAGAGAACTGAGCGAGCAGAAATTTTCGCTAAACTGCTTCAGCAAGGCGCAATTAA
AGAAGACATTGATGTGTTGTTTACCGACAGCACTGAAGCCGAAGCCATCAAGCTTTTCGCCAATACCTATTTGGCAATGC
GAGTAGCATACTTTAACGAGTTAGACAGTTATGCCGAGAGCCATGGTTTAGATTCAAAGCAAATCATTGAAGGTGTAAGC
TTAGATCCTCGCATTGGTAACCATTACAATAACCCTAGCTTTGGTTACGGCGGCTACTGCTTACCTAAAGATACTAAGCA
GCTTCTTGCTAACTACAGTGACGTGCCTAATAACATGATCCAAGCCATTGTAGATGCTAACCGTACACGTAAAGATTTTA
TTGCCGATTCAATTGTAAGTCGTGGCCCTAAAATCGTTGGCATCTACCGCCTCATCATGAAGTCTGGTTCTGACAACTTC
CGCGCCAGTGCAATTCAAGGCATTATGAAGCGTATTAAAGCGAAAGGTATTGAAGTGGTAGTTTACGAGCCAGTACTCAA
AGAAGATGACTTCTTCAATTCACGGGTAGTAAACGACCTAGAAGAGTTTAAGAAAATTTCTGATGTTATCGTAGCCAACC
GTGTAACGGGCGATATCGAAGACGTACTCGACAAAGTTTACAGCCGCGACTTGTTCAACGCCGACTAA

Protein sequence :
MDSTMQKLKIAVAGTGYVGLSNAVLLAQHNEVKAVDLVPEKVEMLNNKKSPIEDKEISEYLTTKELNLEATLDAQVAYKD
ADYVVIATPTDYDPQTNYFNTGSVEAVIKTVLEINPNAVMIVKSTVPVGFTRDAKERFGSDNIIFSPEFLREGKALYDNL
YPSRIIVGERTERAEIFAKLLQQGAIKEDIDVLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAESHGLDSKQIIEGVS
LDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYSDVPNNMIQAIVDANRTRKDFIADSIVSRGPKIVGIYRLIMKSGSDNF
RASAIQGIMKRIKAKGIEVVVYEPVLKEDDFFNSRVVNDLEEFKKISDVIVANRVTGDIEDVLDKVYSRDLFNAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 7e-96 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMBAS45_17060 YP_006804352.1 nucleotide sugar dehydrogenase VFG0963 Protein 2e-105 57