Gene Information

Name : AMBAS45_12850 (AMBAS45_12850)
Accession : YP_006803516.1
Strain : Alteromonas macleodii Balearic Sea AD45
Genome accession: NC_018679
Putative virulence/resistance : Unknown
Product : ClpB protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3006385 - 3008961 bp
Length : 2577 bp
Strand : -
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGAGACTAGATAGATTTACCAGTAAATTTCAGCTCGCAATATCCGATGCTCAATCACTCGCATTGGGGCGAGATCATCA
ATACATTGAACCTGTCCATCTAATGACTGCCATGCTAAATCAGCAAGGCGGGTCAGTACGCCCTTTGCTTGACCAAGCAA
ACATCAATGTAAATGCGCTACGCTCAGCACTGAGCCAAGCTATTGAGCGCCTACCTCGTATTGAAGGCATTGGGGGAGAT
GTTCAATTAAGTAAAGACAGCGGCATTTTGCTAAATCTTTGTGACAAGATAGCGCAGCAGCGAAAAGACGAATACATCAC
TTCAGAAATCTTTGTTCTAGCGGCGCTACAAGATAAAGGGCGCTTGGGGGAAATCCTCAAAAGCCTGAATATCACTAAAG
AAGCTATTGAAAGCGCAATAGACGACATGCGTGGTGGCCAGAAGGTCACGGATCCTAATGCTGAAGATGTACGTCAAGCG
CTTGAAAAATACACGACAGATTTAACCGAGCGAGCAGAACAAGGCAAGCTCGACCCGGTCATTGGTCGAGACGATGAGAT
TCGCCGAACTGTTCAAGTACTGCAGCGTCGAACCAAAAACAACCCAGTACTCATTGGTGAGCCGGGTGTGGGTAAAACGG
CTATTGTTGAAGGGTTGGCTCAGCGCATCATTAATGGCGAAGTGCCTGAGGGCTTAAAGAACAAGCGTGTTCTTGCCCTT
GATATGGGCGCGTTAGTGGCGGGAGCTAAATATCGCGGTGAGTTTGAAGAACGCCTTAAAGCAGTGCTTAATGAGCTGGC
CAAAGAAGAAGGCCGCGTGATCTTATTCGTTGACGAACTGCACACCATGGTAGGTGCAGGGAAGGGCGATGGAGCGATGG
ATGCAGGTAATATGCTTAAACCTGCGTTAGCCCGTGGTGAACTTCACTGCGTTGGTGCTACAACACTGGATGAATATCGT
CAGTACATTGAAAAAGACGCAGCACTTGAACGTCGTTTCCAAAAAGTATTAGTTGAAGAACCAAGCGTTGAAGACACTAT
TGCTATTCTGCGTGGCTTAAAAGAGCGCTATGAGCTTCATCACTCGGTAGATATTACTGATCCCGCTATCGTTGCAGCGG
CAAGTTTGTCGCATCGTTATATTAGCGACCGCCAATTGCCAGACAAAGCCATTGATCTTATAGACGAGGCTGCGTCTAGT
ATTCGATTGCAAATAGACTCCAAGCCCGAAGAGATGGATCGTCTTGAGCGTCGTATCATCCAGCTAAAATTGGAAGAGCA
AGCTCTGGCCAAAGAAACAGATGATGCGAGTCATAAGCGACTTGAGATGATTGAGCTAGAGCGTGAGCAAGCGGAAACCA
AGTACGCAGAGCTTGAGAAAGTGTGGCTGGATGAGAAAGACGCCATGCAGGGCACTCAAACCATTAAAGGGGAGCTTGAG
CAGGCTAAACTTGACTTGGAGATAGCTCGACGTGCATCTGATTTGAATCGTATGTCGGAACTTCAGTACGGCCGTATTCC
AGAGCTTGAAGCAAAGTTAGAGCAAGCGGCTGAAAACGAAACTCGCGAGACGACGTTACTTAAAAATAAAGTGACGGACG
TTGAAATTGCAGATGTGCTTTCGCGATGGACGGGTATACCTGTAGCGCGAATGCTTGAGGGCGAGCGTGAGAAGTTGTTG
CGTATGGAAGACGTACTTCACAAACGGGTTGTTGGACAAGAAGAAGCGGTTGAAGCTGTTTCAAACGCTATTCGCCGTTC
ACGTGCTGGGCTTGCGGATCCAAACCGACCTATTGGCTCATTCTTATTTTTAGGGCCAACTGGCGTGGGCAAAACTGAGC
TCTGCAAAGCCTTGGCAGGCTTTATGTTCGATACTGAGGATGCCATGGTGCGTATCGATATGTCAGAGTTTATGGAAAAA
CACTCGGTAGCACGCTTAGTGGGTGCACCTCCTGGCTATGTTGGCTACGAGGAAGGTGGCTACTTAACCGAAGCGGTGCG
TCGCAAGCCATACTCGGTCATTTTGTTGGACGAGGTTGAAAAGGCACATCCAGATGTATTCAATATTCTGCTTCAAGTAC
TAGATGACGGCCGGTTGACTGACGGACAAGGACGTACTGTAGATTTTAAAAATACCGTTGTGATCATGACGTCCAACTTA
GGCTCAGATATCATTCAAGATAAGCACAACGAAAGTCAGTATGACGATATGAAAGCGTCGGTAATGAGTGTTGTAGGGCA
ACACTTCAGACCGGAGTTCATCAACCGCGTCGATGATATTGTGGTATTCCATCCATTAGGGAAGGAGCAAATAAAATCTA
TTGCTAAAATTCAGCTTGCCTCGCTTCGCGCTAGGCTCGCAGAAAAAGGATATAAGCTTACTCTATCTGCTGCGGCTATG
GATAAATTGGCGGACGCGGGTTTCGACCCAGTGTTTGGCGCACGTCCGCTTAAGCGAGCGATACAAGTGCAGGTGGAAAA
TCCACTCGCGCATCAATTACTCGCTGGCGAATTAATACCGGAATCAACGATTCGTATTGATGCAGATGACAGCGGACTTT
TCGTTGTTAGCAATTAA

Protein sequence :
MRLDRFTSKFQLAISDAQSLALGRDHQYIEPVHLMTAMLNQQGGSVRPLLDQANINVNALRSALSQAIERLPRIEGIGGD
VQLSKDSGILLNLCDKIAQQRKDEYITSEIFVLAALQDKGRLGEILKSLNITKEAIESAIDDMRGGQKVTDPNAEDVRQA
LEKYTTDLTERAEQGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLAL
DMGALVAGAKYRGEFEERLKAVLNELAKEEGRVILFVDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYR
QYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHSVDITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS
IRLQIDSKPEEMDRLERRIIQLKLEEQALAKETDDASHKRLEMIELEREQAETKYAELEKVWLDEKDAMQGTQTIKGELE
QAKLDLEIARRASDLNRMSELQYGRIPELEAKLEQAAENETRETTLLKNKVTDVEIADVLSRWTGIPVARMLEGEREKLL
RMEDVLHKRVVGQEEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALAGFMFDTEDAMVRIDMSEFMEK
HSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVVIMTSNL
GSDIIQDKHNESQYDDMKASVMSVVGQHFRPEFINRVDDIVVFHPLGKEQIKSIAKIQLASLRARLAEKGYKLTLSAAAM
DKLADAGFDPVFGARPLKRAIQVQVENPLAHQLLAGELIPESTIRIDADDSGLFVVSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-102 42