Gene Information

Name : smpB (AMBAS45_08970)
Accession : YP_006802746.1
Strain : Alteromonas macleodii Balearic Sea AD45
Genome accession: NC_018679
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2123145 - 2123624 bp
Length : 480 bp
Strand : -
Note : COG0691 tmRNA-binding protein

DNA sequence :
ATGAAAAAGAATAAAGCCAACAAAAACACCTCAGGAAATATCGCGCAGAATAAAAAAGCGCGTCACGACTATTTCCTAGA
AGACAAGTTCGAAGCCGGACTTGAGCTTCAAGGGTGGGAAATTAAAAGTATTCGTGCCGGTAAAGTGAACATTACCGATG
CGTACATTATTATCCAGAATGCCGAAGCGTATTTGGTAGGGTGTAGAATTAGTCCGCTGAATCAAGCCTCTACCCACGTT
ATCGCTGCTCCAGAGCGTGCTCGCAAATTGTTGCTGAACAAACGAGAAATTGACCGCTTAATGGGTGCGCGAGACCGCCA
AGGTTATTCAATCGTTGCCACGTCTATGTATTGGAAAAAGTGTTGGGTGAAACTAGAAATTCACCTAGCAAAAGGTAAGC
ACGCCCATGACAAGCGTGACACCATTAAAGACAAAGATTGGCAACGTCAAAAAGAAAGAATGATGAAACACAGCGTTTAA

Protein sequence :
MKKNKANKNTSGNIAQNKKARHDYFLEDKFEAGLELQGWEIKSIRAGKVNITDAYIIIQNAEAYLVGCRISPLNQASTHV
IAAPERARKLLLNKREIDRLMGARDRQGYSIVATSMYWKKCWVKLEIHLAKGKHAHDKRDTIKDKDWQRQKERMMKHSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 5e-45 56
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 5e-22 47