Gene Information

Name : AMBAS45_06325 (AMBAS45_06325)
Accession : YP_006802224.1
Strain : Alteromonas macleodii Balearic Sea AD45
Genome accession: NC_018679
Putative virulence/resistance : Unknown
Product : phage integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1481281 - 1482507 bp
Length : 1227 bp
Strand : +
Note : COG0582 Integrase

DNA sequence :
ATGGCACGAATTACCAAACCCCTCACTAATACTGAAGTACAACAGGCTAAGCCCACAGATAAAGAATATATATTGTCCGA
CGGTGAAGGGCTTAGGCTACGTGTAAAGCCCAACGGTTCAAAGCTTTGGATATTCAATTACATAAAACCAGCCACGAAAA
AGCGGGCTAATATTAGCTTTGGTGTATACCCTGATCTATCCCTAAAAGAAGCACGGATAAAAAGAAAAGAAGCAAGGGAA
ATGCTAGCACTAGATATCGACCCTGCAATTCATAGAGCAGAAACTAAAAATAAGGAAAAAGAAGAGCACGAAAATACTCT
TATCCACGTAGCAGAGCAGTGGTTTCGAGTTAAGAAAATCAGCATATCTGCTGATTACGCCCAGGATATTTGGCGATCTT
TGGAGAAACATATTTTCCCTGAAATAGGAAAGGCTCCCATATCAAGATTACGTGCGCCTATGGTGATTAACGTAATAAGA
CCAATAGAAGCAAAAGGAAGTCTAGAAACCGTTAAGAGAATAATTCAGCGACTAAACGAAATTATGATATTCGCTGTTAA
TTCCGGAACAATTGATTCAAACCCTCTGGCAGGCATAGGCAAAGTTTTTCAAGCGCCACAAAAGCAAAATATGCCTTCGA
TACCACCTAGTGAACTCCCAGTTTTTATTTCAAAAGTAGCTAATGCTAGCATTAAACTAACAACGCGATGTTTAATTGAG
TGGCAGTTGCATACTATGGTTAGGCCAGGAGAGGCGGCAGGAACGCGATGGGATGAAATAAACTTCGATTCAGAAATTTG
GAGCATTCCCGCCGGAAGAATGAAAAAAAAGAGACCGCATGTAGTTCCTCTGACTAAACAAGCACTTAAGTTATTAGAAG
TCATGAGGCCTATTAGCGGCCATAGAGAGTATGTTTTCCCCTCTGATCGAAACCCAAAAACACATGCCAACCCCTATTCA
GCCAACGTAGCACTCAAGCGTATGGGATTTCATAAAAAGCTTGTCGCGCATGGGTTAAGGTCAATTGCTAGTACGGCTTT
AAATGAGCATGGATTTGATCCTGATATAATCGAGTCAGCCTTAGCGCATGTTGATAGAAACCAGGTAAGGGCTGCATACA
ACAGAACAGACTATTTAGAGCGTAGAAAAAAAATGATGGCTTGGTGGTCTTCACATATTGAAGAAGCAGGAAAAGGCAAT
CTAACGCTAGGCGGGTCCTCTATTTGA

Protein sequence :
MARITKPLTNTEVQQAKPTDKEYILSDGEGLRLRVKPNGSKLWIFNYIKPATKKRANISFGVYPDLSLKEARIKRKEARE
MLALDIDPAIHRAETKNKEKEEHENTLIHVAEQWFRVKKISISADYAQDIWRSLEKHIFPEIGKAPISRLRAPMVINVIR
PIEAKGSLETVKRIIQRLNEIMIFAVNSGTIDSNPLAGIGKVFQAPQKQNMPSIPPSELPVFISKVANASIKLTTRCLIE
WQLHTMVRPGEAAGTRWDEINFDSEIWSIPAGRMKKKRPHVVPLTKQALKLLEVMRPISGHREYVFPSDRNPKTHANPYS
ANVALKRMGFHKKLVAHGLRSIASTALNEHGFDPDIIESALAHVDRNQVRAAYNRTDYLERRKKMMAWWSSHIEEAGKGN
LTLGGSSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 2e-124 61
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 2e-124 61
int AAK20773.1 integrase Not tested VPI Protein 1e-124 61
int AAK20803.1 integrase Not tested VPI Protein 1e-124 61
unnamed AAA82714.1 integrase Not tested VPI Protein 1e-124 61
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 6e-118 56
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 2e-99 52
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 2e-99 52
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 2e-99 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMBAS45_06325 YP_006802224.1 phage integrase VFG1092 Protein 7e-100 52