Name : lysS (AMBAS45_05665) Accession : YP_006802092.1 Strain : Alteromonas macleodii Balearic Sea AD45 Genome accession: NC_018679 Putative virulence/resistance : Virulence Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1322980 - 1324548 bp Length : 1569 bp Strand : + Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGACTGACCAACAAACAGACGATAACAAATTGATTGCAGAGCGCCGTGCTAAGCTAAGCGCTATTCGCGAGCAGTGCCG TGCAAACGGTTTCCCAAACAGCTTCCGTCGCGAAAACTATGCGGATGAGCTTCAAGCTAAGTTCGGTGAATTCGACAAAG AAACGCTACAAGAGCAGGGTAACAAAGTAAGCATCGCTGGCCGTATTATGGCAAAGCGTGGTCCTTTCATGTTGCTTCAA GATATGACTGGCCGCATTCAGGCATACGCAGATAAAGACACGCAGAAAGCGCTTAAAGCAAAATATGGCGCACTAGATAT TGGCGACATTATTGGCGTGGCGGGTGACCTGCATAAGTCAGGTAAAGGCGACCTTTACGTGAACATGGAGCAATACGAGT TGCTAACCAAAGCACTTCGTCCATTGCCAGAAAAATTCCACGGTTTGAGTGACCAAGAAACGAAATATCGCCAGCGCTAC GTTGATTTGATCACAAGCGAACAAACCCGCAAAACCTTCATGATCCGTAGCAAGATCGTAAACGGTATTCGCAATTATCT TACCGAACGTGACTACCTTGAAGTAGAAACGCCAATGCTTCAGGTTATTCCTGGTGGCGCGACAGCGAAGCCGTTTGTGA CTCACCACAATGCGTTAGATATCGATATGTACCTGCGTATTGCACCAGAGCTTTACCTTAAGCGCCTAGTGGTTGGTGGT TTTGAGCGTGTATTCGAAATTAACCGTAACTTCCGTAACGAAGGCTTATCAACCCGTCACAACCCAGAGTTTACTATGCT TGAGTTCTACCAAGCGTATGCAGACTACAACGATCTAATGAACCTGACAGAAGATATGCTGCGCACGCTGGCAGAAGATA TTCTTGGTACAAGCATTATCAAAAATACAACTAAAGACGCTGAGGGTAACGTAACGTCTGAAGTTGAATACGATTTTGGT AAGCCGTTTGACCGCTTAAGCATGGGCGAAGCTATTCTTAAGTACTGGCCAGAAGCTAACGAGGAAGCTATCCGCGACCC AGAGGCGAATCTTGACGCGCTTAAAGCAATGGCGAAACAGCTTCACATTAAAGAGCCTGAAGTTGACGGTATTTGGGGTG CGGGTAAGTACCTTTGCGAAATCTTCGAAGCAACCGCGGAAGAGAAGCTTATTCAACCTACGTTTATTACAGAATATCCG TGGGAAGTATCGCCGCTTGCGCGCCGTAACGACAACAACCCATTCATTACCGACCGCTTCGAGTTTTTTGTAGGTGGACG TGAGTTAGCGAATGGCTTTAGCGAGCTTAACGACCCAGAAGATCAGGCGGAACGTTTTGCGAAGCAGGTTGAAGAGAAAG ACGCTGGTGACGATGAAGCCATGCACTTTGACGACGATTACATTCGCGCGCTTGAATATGGTTTGCCGCCAACGGCGGGT GAAGGTATCGGGATTGACCGTTTAGCTATGCTATTTACTGATAGCTCAACAATTAAAGATGTTATCTTGTTCCCACACAT GAAGCCTCAGGCGCCAAAAGACGCGCAAGAAGCGGGTGAACAAGAATAA Protein sequence : MTDQQTDDNKLIAERRAKLSAIREQCRANGFPNSFRRENYADELQAKFGEFDKETLQEQGNKVSIAGRIMAKRGPFMLLQ DMTGRIQAYADKDTQKALKAKYGALDIGDIIGVAGDLHKSGKGDLYVNMEQYELLTKALRPLPEKFHGLSDQETKYRQRY VDLITSEQTRKTFMIRSKIVNGIRNYLTERDYLEVETPMLQVIPGGATAKPFVTHHNALDIDMYLRIAPELYLKRLVVGG FERVFEINRNFRNEGLSTRHNPEFTMLEFYQAYADYNDLMNLTEDMLRTLAEDILGTSIIKNTTKDAEGNVTSEVEYDFG KPFDRLSMGEAILKYWPEANEEAIRDPEANLDALKAMAKQLHIKEPEVDGIWGAGKYLCEIFEATAEEKLIQPTFITEYP WEVSPLARRNDNNPFITDRFEFFVGGRELANGFSELNDPEDQAERFAKQVEEKDAGDDEAMHFDDDYIRALEYGLPPTAG EGIGIDRLAMLFTDSSTIKDVILFPHMKPQAPKDAQEAGEQE |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-131 | 55 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
lysS | YP_006802092.1 | lysyl-tRNA ligase | VFG1668 | Protein | 8e-132 | 55 |