Gene Information

Name : AMEC673_04425 (AMEC673_04425)
Accession : YP_006797959.1
Strain : Alteromonas macleodii English Channel 673
Genome accession: NC_018678
Putative virulence/resistance : Virulence
Product : KpsT protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1028571 - 1029245 bp
Length : 675 bp
Strand : -
Note : COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component

DNA sequence :
ATGATAAGAATTGAGAATTTAACAAAGAGTTACCCCAGTAAAATGGGCCCTCAATATATTTTCAAAAATTTGAATTTTGA
TTTTCCTACGGAAAATAACGTCGCAATTTTAGGTAAAAATGGCGCGGGTAAGTCGACTCTTTTCCGTATGCTAGCAAAAA
GCGAATACCCTGACAGAGGCCGAGTTTTAACGAATAAATCCATGTCGTGGCCGGTTGCCCTTCAAACAGGTGTACACCCG
CAAATGACAGGGCGTGAAAATACGCGTTTTGTGGGCCGAATTAACAACGTCAAATCGCTTCCAGAATACGAAGAGCAAGT
GCAAGAATTTGCCGAACTCGGCGCACGCTTCGACCTTCCTGTAAAAACTTACTCATCTGGTATGCGCGCCAAACTCGTAT
TTGCGTGCTGTATGAATATCAATTTTGATATTTACCTTATCGATGAAGCGACATCTGTTGGCGATCCGCTTTTTAGAAAA
AAAGCGCGTTTATCGCTAAAAGAAAAAAGTGAACAAGCGGGCGTTATTATGGTTAGCCATGAACTTGACCAAATCCGCGA
GTTCTGTACGTCTGCCGTTATCATAGATGAAGGCAAACTTACTTATTATCACGATCTCGAAGAAGGCATCGACGTTTATA
CGCAGGATGCAGACAATAAGAAATCACTTAAATAG

Protein sequence :
MIRIENLTKSYPSKMGPQYIFKNLNFDFPTENNVAILGKNGAGKSTLFRMLAKSEYPDRGRVLTNKSMSWPVALQTGVHP
QMTGRENTRFVGRINNVKSLPEYEEQVQEFAELGARFDLPVKTYSSGMRAKLVFACCMNINFDIYLIDEATSVGDPLFRK
KARLSLKEKSEQAGVIMVSHELDQIREFCTSAVIIDEGKLTYYHDLEEGIDVYTQDADNKKSLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 4e-45 47
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 2e-45 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMEC673_04425 YP_006797959.1 KpsT protein VFG1449 Protein 2e-45 47
AMEC673_04425 YP_006797959.1 KpsT protein VFG2563 Protein 5e-37 42