Gene Information

Name : AMEC673_04320 (AMEC673_04320)
Accession : YP_006797938.1
Strain : Alteromonas macleodii English Channel 673
Genome accession: NC_018678
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1005571 - 1008192 bp
Length : 2622 bp
Strand : -
Note : COG0249 Mismatch repair ATPase (MutS family)

DNA sequence :
ATGATGCGCCAATACCTGACTATTAAGGCGCAGCATCCGAATATTTTACTGTTTTATCGCATGGGCGACTTTTATGAGTT
GTTTTACGACGATGCCAAAAAAGCTGCTGAATTACTGGATATTTCATTAACAGCCAGAGGAAAATCTGGTGGTGAACCCA
TTCCGATGGCAGGTGTGCCTTATCACGCGGTGGAAAGCTACCTGTCACGCTTAGTGAAAATGGGCGAGTCAGTAGCCATT
TGCGAACAGGTAGGCGACCCAGCCACTAGTAAAGGCCCTGTTGAGCGCGCGGTACAACGTATTGTTACGCCCGGTACAGT
CACCGACGAAGCGCTGTTAGAAGAACGTCGCGATAATATCTTGGCCGCCGTTTGTGGTCACAGTATGCACTATGGCCTGG
CAACCCTAGATGTTACGAGCGGTCGTTTTGTTGTGTTTGAATGTGACAGCGATGAAAGCCTACTTGCTGAAATTCAGCGC
ATTAATCCAGCTGAACTGCTCTATCCTGAAGGATTTGAAAGCCTAGCATTAGTTGAAAACCGCAAAGGACTTAGACGCCG
TCCTGAATGGGAATTCGACATTGATACCGCCACAGAGCAACTAAACGCGCAGTTTGAAACCAAAACATTAGATGGCTTTG
GAATAAAAGGCGTCACTAAAGGCTTAGGCGCAGCGGGCTGCGTTTTACAATATGTAAAGGATACCCAGCGCACTGCTCTG
CCTCACATTCGCCGCATTCAGACCGAACAGCAAGACAGCCGCGTGCAGCTTGATGCTGCCACCCGCAGAAACCTAGAACT
TACCCATAATTTGTCGGGCGGACAGGAAAATACGCTGTTCAGCGTGATGGATACCACCACTACGGCCATGGGTAGTCGTA
TGCTACAGCGTGTTATTCACTCGCCTTTAACCGACCAGCATGAACTGCACAGCCGCTTAGATGCTGTTGAAACGTTTATT
AATGATGACCCTGAAGATATTCGCACCGCGTTAAAGCACATTGGTGATATAGAACGTATTATGGCGCGCTTAGCCCTTCG
TTCAGCGCGGCCACGCGACTTCGCTCGCCTAAAAAATGCCTTTAACGCCCTGCCTGACTTACAAGATGCTCTAGCTCGGT
TCGACACAGGGCAAATCCGAAGTATTAGCGAAACCATTGGCACTTACCCTGAACTTCAAGCCCTGTTAAATGATGCCATT
ATCGATAACCCGCCAGTGGTAATACGGGATGGCGGCGTGATTGCCGAGGGCTATAACGCCGAACTTGATGAGTTGCGCAA
GCTATCACAAGGTGCTACCGACTACTTAGACGCTATGGAACAGCGTGAGCGCGAGCGCACCGGCATTTCTACGCTAAAAG
TGGGCTATAACAAAGTTCACGGGTTCTTTATTGAAATTAGCCGGGCGAACAGTGCATTAGCGCCTGCTGAATATATTCGA
AGACAAACCCTTAAAAACACTGAACGTTATATAACGCCAGAACTGAAAGAGCACGAAGATAAAGTGCTAAGCAGTCAGGG
CGCTGCGCTTGCTCTTGAAAAGCAGCTTTATGAAGCACTGTTCGACAATTTTGCTCCGTACCTTAACAAGTTAATTGAAA
CAGCCTCTGCGCTTGCTAAGCTTGATGTACTGTGCTGTTTTGCTGAACGTGCCGTGTCACTTGATTGGTATCGACCTCAT
TTGAGTCAAGAATGTGCGCTTACTTATGATGCCGGCCGCCACCCTGTGGTTGAGAATGTAATGAAAGACCCCTTCATTGC
CAACCCGCTACAGCTAGATACCGAGCGCCGCATGCTAATTATTACTGGCCCGAACATGGGCGGTAAATCAACTTACATGC
GCCAAACAGCGCTGATTGCGTTACTAGCCTGTATTGGTAGCTTTGTACCTGCTGAAAACGCCCACATAGGAAAGCTTGAT
CGCATCTTTACCCGTATAGGCGCATCAGATGACTTAGCCTCAGGTCGTTCTACCTTTATGGTTGAGATGACAGAGACGGC
GAACATTCTAAACAATGCCACAGAAAACTCGCTGGTATTGATGGATGAAATAGGCCGTGGTACCAGTACCTATGACGGAT
TGTCACTGGCGTGGGCATGCGCAAGTTATTTAGCAAAGCAGCTGAATGCTTATACGCTTTTTGCCACGCATTACTTTGAA
CTAACTGAACTTCCAGAAACGCAAAGTGGCGTAGTGAATGTGCACTTAGACGCGATGGAGTTTGAAGATACCATACGCTT
CATGCATACCGTGTCAGAAGGCGCGGCGAGCAAAAGCTTTGGTTTACAAGTTGCCCAACTTGCAGGCGTACCTAAGGCGG
TAATAAAAGCGGCGCAACAGAAGCTTGCGGTGTTGGAATCATCACACCTTATGACCAGCACGGAAAATGGATCAGAGAAC
GCCAACGATGAGGCTTTTGTAGCGAAGAGCTCGGTAAAAGGTGGAAATAAGACAAGCGGTTCAGGTAAAGCTACATCAAA
TACCAAAGGCCAAGCTGAAATGCTGTTCCCTGATAAGCCGCACCCGGTAGTAGAAGCCCTTGAAAACTTGTCACCCGATG
AGCTATCACCGCGCCAAGCGCTAGACCTTATCTACACACTTAAGCGCCTGAGCCAGTCTTAA

Protein sequence :
MMRQYLTIKAQHPNILLFYRMGDFYELFYDDAKKAAELLDISLTARGKSGGEPIPMAGVPYHAVESYLSRLVKMGESVAI
CEQVGDPATSKGPVERAVQRIVTPGTVTDEALLEERRDNILAAVCGHSMHYGLATLDVTSGRFVVFECDSDESLLAEIQR
INPAELLYPEGFESLALVENRKGLRRRPEWEFDIDTATEQLNAQFETKTLDGFGIKGVTKGLGAAGCVLQYVKDTQRTAL
PHIRRIQTEQQDSRVQLDAATRRNLELTHNLSGGQENTLFSVMDTTTTAMGSRMLQRVIHSPLTDQHELHSRLDAVETFI
NDDPEDIRTALKHIGDIERIMARLALRSARPRDFARLKNAFNALPDLQDALARFDTGQIRSISETIGTYPELQALLNDAI
IDNPPVVIRDGGVIAEGYNAELDELRKLSQGATDYLDAMEQRERERTGISTLKVGYNKVHGFFIEISRANSALAPAEYIR
RQTLKNTERYITPELKEHEDKVLSSQGAALALEKQLYEALFDNFAPYLNKLIETASALAKLDVLCCFAERAVSLDWYRPH
LSQECALTYDAGRHPVVENVMKDPFIANPLQLDTERRMLIITGPNMGGKSTYMRQTALIALLACIGSFVPAENAHIGKLD
RIFTRIGASDDLASGRSTFMVEMTETANILNNATENSLVLMDEIGRGTSTYDGLSLAWACASYLAKQLNAYTLFATHYFE
LTELPETQSGVVNVHLDAMEFEDTIRFMHTVSEGAASKSFGLQVAQLAGVPKAVIKAAQQKLAVLESSHLMTSTENGSEN
ANDEAFVAKSSVKGGNKTSGSGKATSNTKGQAEMLFPDKPHPVVEALENLSPDELSPRQALDLIYTLKRLSQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMEC673_04320 YP_006797938.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 63