Gene Information

Name : AMEC673_18950 (AMEC673_18950)
Accession : YP_006800843.1
Strain : Alteromonas macleodii English Channel 673
Genome accession: NC_018678
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4461308 - 4461745 bp
Length : 438 bp
Strand : +
Note : COG2165 Type II secretory pathway, pseudopilin PulG

DNA sequence : 
ATGAAAACACTTAATCGCAGTTCTGGTTTCAGTTTGATTGAAGTCATGGTCGTACTTCTAATCATCGGTATTATGGCGTC
TATGGTGGCACCGCAAATCTTGGGTAACCAAGAAGAAGCGCAGCTTAAAAAGGCGGCGGTAGACATCCAGCAAATGGAAA
GTGCGCTTGAGATGTACAAGCTGCGTAACAACCGCTTTCCAACCACAGAACAGGGACTAGAAGCGCTAGTTACCGCACCA
ACTATCGACCCAATTCCACGTAATTACCCTGAAGGTGGTTTCATTAAACGCCTGCCTGAAGATCCGTGGGGCAATCCATA
TGCACTAATTAGCCCGGGAGAACTTGGCGTAGTTGATATTTTCTCTAATGGTCCAGACGGCGAACCGGGTACTGATGATG
ACATTGGTAACTGGAACATTAACGAATACCTGAACTAA

Protein sequence : 
MKTLNRSSGFSLIEVMVVLLIIGIMASMVAPQILGNQEEAQLKKAAVDIQQMESALEMYKLRNNRFPTTEQGLEALVTAP
TIDPIPRNYPEGGFIKRLPEDPWGNPYALISPGELGVVDIFSNGPDGEPGTDDDIGNWNINEYLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 3e-35 52
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-35 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMEC673_18950 YP_006800843.1 general secretion pathway protein G VFG2050 Protein 8e-36 52
AMEC673_18950 YP_006800843.1 general secretion pathway protein G VFG1871 Protein 2e-29 48
AMEC673_18950 YP_006800843.1 general secretion pathway protein G VFG0180 Protein 1e-30 47