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Name : AMEC673_18945 (AMEC673_18945) Accession : YP_006800842.1 Strain : Alteromonas macleodii English Channel 673 Genome accession: NC_018678 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : - COG ID : - EC number : - Position : 4460082 - 4461308 bp Length : 1227 bp Strand : + Note : COG1459 Type II secretory pathway, component PulF DNA sequence : ATGGCGGCATTCGCTTTTAAGGCGGTTAATGCCCGCGGTAAAAATACAAATGGCGTACTTGAAGGTGATAACGCACGCCA GGTTCGCCAACAGCTGCGCGAAAAAGGGTTAATTCCCTTAGAAGTAGAGCAGGTCGCAGAGCGCGCACAAAGCGAAGGCA AAGGCCTGTCGTTTTCTTTATTTAAACCCCGTATTTCAGCATCAGACTTAGCGCTACTCACGCGTCAGCTCGCCACCCTT GTAGAATCGGCCCTTCCCGTTGAAGAAGCACTGCTTGCCGTCGCTGAACAGTGTGAAAAGCCTCGTCAGAAAAACATGAT GATGGCAGTACGCAGTAAAGTCGTGGAAGGACATGGACTTGCCGATGCATTGGGTCAATTTCCAAGTGTGTTCGACGAGC TATACCGTGCGATGGTTGCAGCTGGTGAAAAATCAGGTCACCTTGATACCGTGCTTAACCGCCTTGCCGACTACACAGAA CGCAGACAACAAACCCGCAGCCAAATTACACAAGCGATGATTTACCCATCGTTAATGCTGTTCTTTGCAATGGGTATCGT GTTGCTATTGTTAACGGTGGTAGTGCCCAAAATTGTGGGGCAGTTCGATCACATGGGGCAAGACCTCCCGGCCATTACCC AGTTTCTAATTTCTGTCAGTACCTGGCTGCAAAATTACGGCTTATTTATGCTTATTGGTATTGCCGTGCTTGTTGTCATT ATTCAGCGCGTGCTGCAGCAAAAGCACATGAAGCTGCGCTACCACAGAGCGCTGTTAACCTTGCCGTTAATTGGCCGAGT GTCTCGCGGGCTCAATACCGCGCGTTTTGCACGTACCTTAAGTATTTTAAGTGCCAGTGCGGTTCCACTACTAGAAGCTA TGCGTATTTCAGGTGATGTGCTGGAAAATCAGCATATTAAAAACCAAGTGGCAGATGCAGCCATTAACGTTAAAGAAGGC AGCAGCCTGCGGGCGGCACTAGATAACACAAAAATGTTTCCACCAATGATGATGCATATGATTGCGTCTGGTGAAAAATC GGGTGAGCTACAGCAAATGCTAGCTCGCGCCGCAGATAATCAAGATAGGGAATTTGAAGCGCTTATTGGTGTCTCACTTA AGGTATTTGAACCCTTACTTATTGTATCGATGGCAGGCATTGTTCTGTTTATCGTTATGGCAATATTGCAACCAATTTTA GCATTGAACAACATGGTGAATATTTAA Protein sequence : MAAFAFKAVNARGKNTNGVLEGDNARQVRQQLREKGLIPLEVEQVAERAQSEGKGLSFSLFKPRISASDLALLTRQLATL VESALPVEEALLAVAEQCEKPRQKNMMMAVRSKVVEGHGLADALGQFPSVFDELYRAMVAAGEKSGHLDTVLNRLADYTE RRQQTRSQITQAMIYPSLMLFFAMGIVLLLLTVVVPKIVGQFDHMGQDLPAITQFLISVSTWLQNYGLFMLIGIAVLVVI IQRVLQQKHMKLRYHRALLTLPLIGRVSRGLNTARFARTLSILSASAVPLLEAMRISGDVLENQHIKNQVADAAINVKEG SSLRAALDNTKMFPPMMMHMIASGEKSGELQQMLARAADNQDREFEALIGVSLKVFEPLLIVSMAGIVLFIVMAILQPIL ALNNMVNI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 5e-88 | 54 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-86 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| AMEC673_18945 | YP_006800842.1 | general secretion pathway protein F | VFG2049 | Protein | 2e-82 | 53 |
| AMEC673_18945 | YP_006800842.1 | general secretion pathway protein F | VFG0181 | Protein | 4e-85 | 50 |
| AMEC673_18945 | YP_006800842.1 | general secretion pathway protein F | VFG1870 | Protein | 1e-76 | 44 |
