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Name : AMEC673_18935 (AMEC673_18935) Accession : YP_006800840.1 Strain : Alteromonas macleodii English Channel 673 Genome accession: NC_018678 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : - COG ID : - EC number : - Position : 4456463 - 4458514 bp Length : 2052 bp Strand : + Note : COG1450 Type II secretory pathway, component PulD DNA sequence : ATGAAAAGGCGCACTAGCCAAAAACTATTATCTCGCTTGAGCACAGCCATGTGTACAGCGCTTCTGTGTTTCTCGGTGAC GGCCGCTGAGTACATGCCTAATTTCAAAGATACTGACATCAACGAGTTTATTAATATTGTTGGTAAAAATCTTGAGCGCA CCATTATTGTCGACCCTAACGTACGTGGAAAAATAAGCGTACGCAGCTATGACATGCTCGATGAAGATCAGTACTACCAG TTTTTCCTAAACGTACTACAAGTGTATGACTTCGCCGTTGTAGAAATGCCTAGCGGTATTTTGAAAGTGGTTCGCTCGAA AGACGCTAAAACATCCAATATTCCTGTTGTTGAAGGCGCTAATCGCGACGGCGATGAAATGATCACTCGCGTTGTGCCTG TTTATAACGTACCGGTGCGCGAACTTGCACCTATTTTACGTCAGCTTAATGACCAGGCGGGCGGCGGTAACGTGGTTAGC CACGACCCATCGAACGTAATGATGCTAACCGGCCGTGCTGCGGTAGTTAACCGACTAGTAGAAATTATCGAGCGCGTGGA CCGTGCCGGTGACGAAGAAGTAGAAATCGTTAAACTTCGCTATGCGTCAGCATCAGAAATGGTGCGCATCATTGACAGCA TTAATAAATCGCAAGGAAAAGCTAATACAGGAACTAAGTCGGAGCCTCGCGTTGTGGCAGACGACAGAACTAACTCGGTT ATTGTGAGCGGCGATATTAAAGCACGCCAGCGTCTTATCAACCTTATTCAGCGCATGGATCAAGAGCTTGAATCAAACGG CAACACCCGCGTGCTGTTTCTTAACTACGCTAAAGCGGAAGATTTAGTAAAAGTATTGCAGGGCGTATCTGCTAGCATTC AAGCAGAAGAACAAGGCGGTGGCACTACATCGCGCCGAGCGGGTTCAAACCGTGAAATCAGCATTGATGCACATGAAGAT TCTAACGCCATTGTTATTACCGCAGAGCCGGACATGATGCGCTCGTTAGAAGAGGTAGTACGTCAGCTTGATATTCGCCG TGCGCAGGTACAAGTTGAAGCCATTATCGTTGAAGTCTTTGAAGGCGACGGCACTACATTGGGTGTGCAGTGGGCTTCTG AAGCCGGCGGCGGTACACAGTTCAGCAACGGTGTTGTACCGGTTGGATCATTGGCGGTAGCCCTTAAGCAAGCAGAAGAC GATACCGATACCGAAGCCTATGTAACAGATGATGGCGAAGTGGTCACAGTTAACACCACCGATGAAGGCGATTACACCGC ACTAGCGAGCCTTTTAGGCGGCGCTAACGGCCTTATTGCCGGCGTTATCGAAAATGGCTGGGGCGCGGTAGTACAGGCAG TAAGCACCGACACCAATTCAAATATTCTTGCCACACCTCACCTAACTACTATGGATAACGAAGAAGCGTTTTTCATTGTA GGTCAGGAAGTGCCTATTATCACAGGCACAACTACAGGGGCGAACAACTCTAACCCTTTCCAAACCGTTGACCGCCAAGA AGTGGGTATCAAACTTAAAGTTACACCACAAATCAACGAAGGCGACGCGGTACAGCTGCTTATCGAACAAGAAGTGTCTA GCGTAAGTGGCGCTACATCGGTAGATATTTCAATTAACAAGCGTGAAATTAAAACCACGGTGATCGTAGATGATGGCGGC ACTATTGTTCTTGGCGGTTTGATTGACGAAGACGTGCAAGAAAGTGAATCAAAAGTGCCGTTATTAGGTGACATTCCAAT ACTCGGTCACTTATTCAAATCGACATCAACCAGCAAGCGTAAGCGTAACTTGATGGTATTCTTAAAACCGACTATCGTCC GCGACGGCGCAACAATGAACGCAATCAGCCATCGCAAATACAACTACATTCGCGCACTTCAGCTTAAACGCCAGCAAGAA GGTGTTTCGCTAATGCCTTATGAAGAGACGCCAAGCATTCCTCAATGGGATGACGCACTCGCTTTACCTCCTTCATTTGA AGAATACCTCTCGGAGAAAGAGAAGCAGAAACAAGAAGAAGGTAACGACTAA Protein sequence : MKRRTSQKLLSRLSTAMCTALLCFSVTAAEYMPNFKDTDINEFINIVGKNLERTIIVDPNVRGKISVRSYDMLDEDQYYQ FFLNVLQVYDFAVVEMPSGILKVVRSKDAKTSNIPVVEGANRDGDEMITRVVPVYNVPVRELAPILRQLNDQAGGGNVVS HDPSNVMMLTGRAAVVNRLVEIIERVDRAGDEEVEIVKLRYASASEMVRIIDSINKSQGKANTGTKSEPRVVADDRTNSV IVSGDIKARQRLINLIQRMDQELESNGNTRVLFLNYAKAEDLVKVLQGVSASIQAEEQGGGTTSRRAGSNREISIDAHED SNAIVITAEPDMMRSLEEVVRQLDIRRAQVQVEAIIVEVFEGDGTTLGVQWASEAGGGTQFSNGVVPVGSLAVALKQAED DTDTEAYVTDDGEVVTVNTTDEGDYTALASLLGGANGLIAGVIENGWGAVVQAVSTDTNSNILATPHLTTMDNEEAFFIV GQEVPIITGTTTGANNSNPFQTVDRQEVGIKLKVTPQINEGDAVQLLIEQEVSSVSGATSVDISINKREIKTTVIVDDGG TIVLGGLIDEDVQESESKVPLLGDIPILGHLFKSTSTSKRKRNLMVFLKPTIVRDGATMNAISHRKYNYIRALQLKRQQE GVSLMPYEETPSIPQWDDALALPPSFEEYLSEKEKQKQEEGND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-152 | 53 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 1e-159 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| AMEC673_18935 | YP_006800840.1 | general secretion pathway protein D | VFG2047 | Protein | 1e-149 | 53 |
