Gene Information

Name : AMEC673_01825 (AMEC673_01825)
Accession : YP_006797448.1
Strain : Alteromonas macleodii English Channel 673
Genome accession: NC_018678
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 431392 - 432867 bp
Length : 1476 bp
Strand : +
Note : COG0753 Catalase

DNA sequence :
ATGAGTAAGTGTCCATTTTCAGGTGCAGCTATAAAACCTACTACGCTAACGTCTAGCAATGGTGCGCCCGTTGCCAATGA
TAATCAGAGCCGAACAGCGGGGCCACGCGGGCCGGTTACGTTCGACAACCATTATTTGTTTGAGAAGCTTGCGCACTTCA
ACCGCGAGCGAATTCCAGAGCGTGTAGTTCACGCAAGGGGCAGTGCTGCATATGGCACCTTTACTCTAACTAAGAGCTTA
TCTGACTACACTATTGCAGACTTTCTGCAAAAAGAGGGGCAAAAAACCGACGTGTTTTTGCGCTTTTCTACCGTAGGTGG
TGGTCAGGATTCAAGTGACTATGCCCGTGATCCTCGTGGTTTCTCAGTGAAGTTTTATACCGAACAGGGAAACTGGGACA
TGGTAGGAAATAATACTCCGGTATTCTTCTTACGAGATGGCATCAAGTTTCCTGACTTCATTCACAGTCAAAAGAAAAAC
CCGCGTACGAATTTGCCGGATCCGCAGGCCGTGTATGAGTTTTGGGCGAACAACCCTCAGTCATTACACCAATCGACAAT
CTTGATGTCTGATCGCGGTATTCCACTTTCATATCGCCATGTGAATGGCTATAGCTCTCATACGTTGAGTTTCTGGAATA
ACGCAGGCGAACGCTATTGGGTGAAATGGCACTTTAAAACTAACCAAGGTATTAAAACGCTAACTAGCGAAGAGGCGGCA
AAGATGCCTGCTTATGGCGCTCAGCAAGACTTGGTCGAAAGCATTGATAACGGCGAATTTCCATCGTGGACCGTGAATGT
GCAGATTATGAATGAAGAGGAAGCGCGTAATTACCACATTAATCCGTTTGACCTAACGAAGGTGTGGCCGCACAGCGACT
TTCCATTAATTGAAGTAGGGCAGTTGGAGTTAAACCGTAATGTTGATAACTACTTTGCAGAAACTGAGCAAGCCGCGTTC
GCGCCGAGCAATTTGGTACCGGGTATTGGTGCGTCGCCAGACAGAATGCTTCAAGCGCGACTAATTGGATATCAAGATGC
GCACAGATACCGTATTGGTGCAAACTACAACCAAATACCGGTAAACGCGCCGCGTTGTCCAGTGCACAATTATCAAAGAG
ATGGAGCCTTTGCGGGAATTAACCCAGCACTTGCAGGAAGTGGAGCCAACTTCTATCCAAATAATCGCGCGCGAGTTGGT
GAGCCGGCTGAAGCACCAGAGGTTCAAGAGCCGCCTATGCCGCTAGAGCAAGACGCATGGTTAGATATTTACGATAACCG
TGACGAAGATAACTACTCACAGGCCGGTGATCTTTACCGCATTATGAGTGAAGATCAAAAACAACAGCTGGTAAACAACA
TTGCTGACGGCCTAAGCCAAGCTACTAAGGACGTTCAAGAGGCAATGTTCGTTCAATACGACCTAGCTGATAGCGACTAT
GGTGAGCGGGTGAGAAAGGCGGTAGCCAGCAAATAG

Protein sequence :
MSKCPFSGAAIKPTTLTSSNGAPVANDNQSRTAGPRGPVTFDNHYLFEKLAHFNRERIPERVVHARGSAAYGTFTLTKSL
SDYTIADFLQKEGQKTDVFLRFSTVGGGQDSSDYARDPRGFSVKFYTEQGNWDMVGNNTPVFFLRDGIKFPDFIHSQKKN
PRTNLPDPQAVYEFWANNPQSLHQSTILMSDRGIPLSYRHVNGYSSHTLSFWNNAGERYWVKWHFKTNQGIKTLTSEEAA
KMPAYGAQQDLVESIDNGEFPSWTVNVQIMNEEEARNYHINPFDLTKVWPHSDFPLIEVGQLELNRNVDNYFAETEQAAF
APSNLVPGIGASPDRMLQARLIGYQDAHRYRIGANYNQIPVNAPRCPVHNYQRDGAFAGINPALAGSGANFYPNNRARVG
EPAEAPEVQEPPMPLEQDAWLDIYDNRDEDNYSQAGDLYRIMSEDQKQQLVNNIADGLSQATKDVQEAMFVQYDLADSDY
GERVRKAVASK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 5e-110 52
katA YP_005126717.1 catalase Not tested Not named Protein 1e-88 44
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 5e-87 43
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 5e-87 43
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 5e-87 43
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 5e-87 43