Gene Information

Name : AMEC673_18010 (AMEC673_18010)
Accession : YP_006800655.1
Strain : Alteromonas macleodii English Channel 673
Genome accession: NC_018678
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4231539 - 4232924 bp
Length : 1386 bp
Strand : -
Note : COG0305 Replicative DNA helicase

DNA sequence :
GTGGCGTCTGCGTCTAAAAACGATAAGAATGTTGAAAAATTGAAGGTTCCACCTCATAGCATTGAGGCTGAGCAATCTGT
TTTGGGCAGCATGCTTATTGACCCTGAAAGCTGGGACAAAGTCGCGGAGCTTGTTACCGATAACGATTTTTACAATCGCT
CACACCAAATTATCTTTCGTGCTATCACTCGACTACTAAACAGTAGCCAGCCAATAGATCTTATAACAGTATCAGAAGAG
CTGGAAAAGCATGATGAACTGGAAGATGCTGGTGGTTTTGCCTACTTAGGTGAACTTGCCAAAAACACGCCAAGTTCTGC
GAACGTTGTGTCTTATGCGCAAATTATTAGTGAGCGCGCGATAACCCGAGAGCTTATTGGCGTGGCGCATGAAATAGCGG
AAGTTGGGTACAACCCCGAAGGCCGTGACAGTGCAGACATTCTTGACCTGGCCGAAAGTAAAGTATTTGAAATTGCCGAA
CGAAGAACTGGTGAAAACGAAGGTCCTCGCGATGTCGAGTCTATCTTAGGGAAGACCATTGACCGTCTAGAAGAATTGGT
GAAAACCAATAAAGATGTTACCGGTGTTACTACCGGCTTTACCGACCTAGACAAAATGACCAGTGGTATGCAGCCCTCTG
ACCTTATTATCGTGGCGGCTCGTCCATCGATGGGTAAGACCACCTTCGCCATGAACTTGATTGAAAACGCCATGATGGCA
GAAGACAAACCTGTACTTGTTTTCAGTCTTGAGATGCCCTCAGAACAAATCATGATGCGTATGTTGGCGTCATTAAGCCG
CGTTGACCAAACCAAAATTCGTACTGCACAGCTGGATGATGAAGATTGGGCACGTATCTCCAACACCATGGCTATGCTCA
AAGACAAAGATTGTTTGTTTGTTGATGATTCATCAGGCCTTACACCAATGGACGTGCGAAGTCGCGCAAGAAAACTCGCT
CGCGAACGCGGTGGAATCAGTCTCATCATGGTGGATTATCTTCAGTTGATGCGCGTACCTTCTCTTAGCGATAACCGAAC
ATTGGAAATTGCAGAGATCTCTCGCTCATTGAAAGCATTGGCTAAAGAGCTTGAAGTACCGGTAGTCGCCCTTTCACAGC
TTAACCGTACGCTAGAACAACGCGCCGATAAACGTCCAGTTAACTCTGACCTTCGTGAGTCTGGCTCAATCGAGCAGGAT
GCCGACCTTATTATGTTTATTTATCGTGATGAGGTTTATCACGAAAACAGTGAGTATAAGGGCATTGCAGAGATTATTAT
TGGTAAACAGCGTAACGGCCCAATTGGTACCTGTCGACTTACGTTCCAAGGTCAGTTCTCACGATTTGACAACTATGCAG
GCCCTGCCATAGCCGACGAATACTAG

Protein sequence :
MASASKNDKNVEKLKVPPHSIEAEQSVLGSMLIDPESWDKVAELVTDNDFYNRSHQIIFRAITRLLNSSQPIDLITVSEE
LEKHDELEDAGGFAYLGELAKNTPSSANVVSYAQIISERAITRELIGVAHEIAEVGYNPEGRDSADILDLAESKVFEIAE
RRTGENEGPRDVESILGKTIDRLEELVKTNKDVTGVTTGFTDLDKMTSGMQPSDLIIVAARPSMGKTTFAMNLIENAMMA
EDKPVLVFSLEMPSEQIMMRMLASLSRVDQTKIRTAQLDDEDWARISNTMAMLKDKDCLFVDDSSGLTPMDVRSRARKLA
RERGGISLIMVDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELEVPVVALSQLNRTLEQRADKRPVNSDLRESGSIEQD
ADLIMFIYRDEVYHENSEYKGIAEIIIGKQRNGPIGTCRLTFQGQFSRFDNYAGPAIADEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 4e-101 51
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 5e-106 50
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 7e-102 50
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 4e-106 50
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 2e-103 50
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 4e-94 48
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 4e-94 48
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 3e-86 46
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 3e-81 44