Gene Information

Name : AMEC673_15860 (AMEC673_15860)
Accession : YP_006800231.1
Strain : Alteromonas macleodii English Channel 673
Genome accession: NC_018678
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3704455 - 3705972 bp
Length : 1518 bp
Strand : -
Note : COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGATTTATGCAAAGCCAGGTAGTGAAGGTTCGGTCGTAAGCTTCAAAGAAAGCTACGGTAATTTTATCAATGGCGAATG
GGTAGCACCGGTTAAAGGTGAGTACTTCACCGCAACATCTCCAGTAGACGGCAGCGACATCGCACAAATCCCACGCTCAA
CATCTGAAGACATTGAGCTTGCGTTAGATGCCGCTCACGCTGCGAAAAAGGGCTGGGCAGATACGTCAGTAGCTGAGCGT
TCTAACATTCTTCTGAAAATTGCCGATCGCATTGAAGAAAACCTAGAGCTACTTGCCGTTGCGGAAACATGGGACAATGG
TAAAGCCGTTCGCGAAACGCTTAATGCAGACATTCCGCTGTGCGCAGACCACTTCCGTTATTACGCAGGCTGTATTCGAA
GCCAAGAAGGCACCATCGGTGAAATTGATAAAAACACGGTGGCGTATCACTTCCACGAACCTTATGGTGTTGTTGGGCAA
ATCATTCCATGGAACTTCCCGCTACTTATGGCTGCATGGAAACTTGCGCCAGCACTTGTTACCGGTAACGTAGTGGTGCT
AAAGCCAGCAGAACAAACGCCAGTATCTATCTTATTGTTCGCCGAACTAATCCAAGACCTACTACCACCGGGTGTACTAA
ACATCGTTAACGGGTTCGGGGCAGAAGCCGGACAGGCTCTTGCAACAAGCACAAGAATTGCAAAAATTGCGTTTACTGGC
TCTACACCTGTTGGCGGACATATCCTTCGCTGTGCTGCTGAAAACCTTATTCCATCTACCGTTGAGCTTGGCGGCAAGTC
GCCAAACTTATTCTTCCCAGACATCATGAATCACGAGCCTGAATTTATTGATAAGTGTGCGGAAGGTTTAGTGCTTGGAT
ACTTCAACCAAGGTGAAGTATGTACGTGTCCTTCTCGAGCGATTATTCACGAAGACATCTATGATGCATTCATGGAAAAA
GTGTTGGAAAAAATTCAGAAGATCAAACGTGGCAACCCACTAGACACAGACACCATGGTAGGTGCACAGGCATCTAATGA
GCAGTTCGAAAAGATCCTTAAATACATCGATATCGGTAAGTCAGAAGGGGCTCAGGTTGTCACTGGTGGTGAGAAAGAGC
AGCTACCTGGCTTTGATGGAGGCTACTACATTCAGCCGACTATCTTGAAGGGTGAAAACCACATGCGTGTGTTCCAGGAA
GAGATTTTTGGTCCGGTAATCGCTGTTCAAACCTTCAAAACCGAAGAAGAGGCGATTGAGATTGCCAATAATACAAGCTT
CGGACTTGGCGCTGGTGTATGGAGCCGCGATGCGAATGTAGCATTCCGCGTGGGTCGAGCGATTGAAGCAGGTCGCGTAT
GGACGAACTGTTATCACTTGTATCCAGCTCACGCTGCGTTTGGCGGCTACAAGAAATCGGGCATTGGCCGCGAAACCCAC
AAGATGATGCTAGATCACTACCAGCAGACAAAAAATCTATTGGTAAGCTACGACATCAACCCACTTGGTTTCTTCTAA

Protein sequence :
MIYAKPGSEGSVVSFKESYGNFINGEWVAPVKGEYFTATSPVDGSDIAQIPRSTSEDIELALDAAHAAKKGWADTSVAER
SNILLKIADRIEENLELLAVAETWDNGKAVRETLNADIPLCADHFRYYAGCIRSQEGTIGEIDKNTVAYHFHEPYGVVGQ
IIPWNFPLLMAAWKLAPALVTGNVVVLKPAEQTPVSILLFAELIQDLLPPGVLNIVNGFGAEAGQALATSTRIAKIAFTG
STPVGGHILRCAAENLIPSTVELGGKSPNLFFPDIMNHEPEFIDKCAEGLVLGYFNQGEVCTCPSRAIIHEDIYDAFMEK
VLEKIQKIKRGNPLDTDTMVGAQASNEQFEKILKYIDIGKSEGAQVVTGGEKEQLPGFDGGYYIQPTILKGENHMRVFQE
EIFGPVIAVQTFKTEEEAIEIANNTSFGLGAGVWSRDANVAFRVGRAIEAGRVWTNCYHLYPAHAAFGGYKKSGIGRETH
KMMLDHYQQTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-163 66
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-173 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-173 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-173 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-172 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMEC673_15860 YP_006800231.1 aldehyde dehydrogenase family protein VFG0082 Protein 6e-164 66