Gene Information

Name : AMEC673_15320 (AMEC673_15320)
Accession : YP_006800123.1
Strain : Alteromonas macleodii English Channel 673
Genome accession: NC_018678
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3577528 - 3578937 bp
Length : 1410 bp
Strand : +
Note : COG0174 Glutamine synthetase

DNA sequence :
ATGTCAGTAGAAAAGGCATTAGAGCTGATTAAAGAAAGTGAAGCGAAATTTGTAGATTTACGTTTTACCGATACAAAGGG
TAAAGAACAACACGTATCTATTCCTGCGAGCGTTGTTGATGAAGAGTTTTTCGAAGAAGGTAAAATGTTCGATGGTTCTT
CAATCGCTGGCTGGAAAGGCATCAACGAATCAGACATGGTTCTTCTTCCAGACGCAACAAGCTGCGTAGTTGACCCTTTC
GCTGAAGAGACACAAGTAAACATCCGTTGTGACATCGTTGAACCTTCAACAATGGAAGGTTATGAGCGTGACCCTCGTTC
AGTTGCTCGCCGTGCAGAAGAATTCCTAAAATCAACTGGCATCGGTGACACATGTTTCTTCGGCCCAGAGCCAGAGTTTT
TCCTTTTTGATGACGTACGCTTCCACACTGACATGGCGGGTTCTTTCTACAAGATTGACTCTTCTGAAGCAAAGTGGAAC
TCTGGCGAAGAGTTTGAAGGCGGCAACATGGCACACCGCCCTGGCGTTAAAGGCGGTTACTTCCCAGTACCACCAGTGGA
CTCTGCTCACGATATCCGTGCTGCAATGTGTCTAGTTATGGAAGAGATGGGCCTTGTTATCGAAGCGCACCACCACGAAG
TAGCAACTGCTGGCCAAAACGAAATTGCTTGCCAATTCAATACGCTAGTTAAGAAAGCTGACGAAATTCAAGTTTACAAG
TATGTTGTTCACAACGTTGCACACGCATACGGTCAAACAGCTACCTTTATGCCTAAGCCGCTTGTTGGCGATAACGGTTC
TGGTATGCACTGTCACCAATCTATCTCTAAAGATGGCGTAAACATCTTTGCAGGTGACAAGTACGCAGGTCTTTCTGAGG
AAGCACTTTACTACATTGGTGGTATCATCAAGCACGCGCGCGCAATCAACGCGTTTGCTAACGCTTCTACTAACTCATAC
AAGCGTCTAGTTCCTGGATTCGAAGCACCGGTAATGCTTGCATACTCTGCACGTAACCGTTCTGCATCTATTCGTATTCC
TCATGTAACTAGCGATAAAGCACGTCGTATTGAAGTACGTTTCCCTGACCCAACAGCTAACCCATACCTAGCGTTCACTG
CTATGCTTATGGCGGGTATCGACGGTATTAAGAACAAGATCCACCCTGGTGATTCAATGGATAAAGACTTGTACGACCTA
CCGCCAGAAGAAGCTGCTGAAATTCCAACAGTTGCAAGCTCGCTAGAAATGGCACTTGAAGCTCTTGATAACGACCGTGA
CTTCCTTAAAGCTGGTGGCGTTATGACTGACGACATGATTGATGCATACATCGATCTTAAGTCTGAAGAAGTAACGAAAC
TTAACATGACTACTCACCCTGTTGAGTTCGACATGTACTACAGCGTGTAA

Protein sequence :
MSVEKALELIKESEAKFVDLRFTDTKGKEQHVSIPASVVDEEFFEEGKMFDGSSIAGWKGINESDMVLLPDATSCVVDPF
AEETQVNIRCDIVEPSTMEGYERDPRSVARRAEEFLKSTGIGDTCFFGPEPEFFLFDDVRFHTDMAGSFYKIDSSEAKWN
SGEEFEGGNMAHRPGVKGGYFPVPPVDSAHDIRAAMCLVMEEMGLVIEAHHHEVATAGQNEIACQFNTLVKKADEIQVYK
YVVHNVAHAYGQTATFMPKPLVGDNGSGMHCHQSISKDGVNIFAGDKYAGLSEEALYYIGGIIKHARAINAFANASTNSY
KRLVPGFEAPVMLAYSARNRSASIRIPHVTSDKARRIEVRFPDPTANPYLAFTAMLMAGIDGIKNKIHPGDSMDKDLYDL
PPEEAAEIPTVASSLEMALEALDNDRDFLKAGGVMTDDMIDAYIDLKSEEVTKLNMTTHPVEFDMYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 8e-106 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMEC673_15320 YP_006800123.1 glutamine synthetase VFG1399 Protein 3e-115 50