Gene Information

Name : AMEC673_12745 (AMEC673_12745)
Accession : YP_006799612.1
Strain : Alteromonas macleodii English Channel 673
Genome accession: NC_018678
Putative virulence/resistance : Unknown
Product : Riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2976909 - 2978048 bp
Length : 1140 bp
Strand : -
Note : COG0117 Pyrimidine deaminase

DNA sequence :
GTGAACCACGATACGGTTAAAAACGATTATTTTTGGATGGCAAAAGCCATTCAGCTTGCCCAACAAGGGCGTTTTACCAC
TTCTCCTAACCCTCGCGTAGGCTGTGTAATTGTTGACGAAAACAATCATTTGCTTGGTCAGGGATATCACATTCAAGCTG
GTACACCCCATGCCGAAGTGCATGCATTAAGACAAGCATCTAACGCACGTCCGCAAGGCGCAAAGGGCGCGACGGCATAC
GTTACACTTGAACCTTGTAGTCATTTTGGTCGCACACCGCCTTGCGCTGTTGCCTTGGTAGAAGCAAAGGTAGCGCGTGT
TGTTATTGCTATGACCGACCCGAATCCAAACGTATGCGGTAACGGTATTAGCATTCTGCAGGAAGCAGGCATCGAAGTGG
TAAGCGAAGTGATGGCTGCTGAGGCCGCAGCGCTAAACCCCGGGTTTATTAAACGCATGCTTACTGGTAAGCCCTTTGTT
CGCGTGAAATTAGGCATTAGCCTAGATGGAAAAATAGCCCTTCAAAATGGGGTGAGTCAGTGGATTACTGGTGCAGAAGC
AAGGCGGGATGTGCAACAGTATCGTGCACAAAGTTGCGTGGTGCTCACAGGCTCAGGTACGGTGAAAGCCGATAACCCTA
GTTTGTTGGTTAGAGAACAAGAAGCACAGTTCACTAATTATCCTCTGGAACACATTCGTCAACCTGCCCGTGTTGTTATC
GATGGCAAAAGCGCGCTTAGTCGAGGCTACGCATTGTTTAATGACGGCAACCTAACCTTAACTGCTACATCGCAAGCCCA
CCCAGATACGGCAACACAGCACTATCTTTCGGTAGATGAAAAAGACGGTAAACTCAATTTACATTCACTTATGTCAGCAC
TAGGCGATAAGCAATACAATGAAGTCTGGGTGGAAGCAGGCCCTGGCCTTGCCGGTGCATTATTGCAAGAAGGGCTGGTG
GATGAACTTATTTGCTACCAAGCGCCTAAGCTTTTAGGTGATAAGGGAGTCAGTATGGTTAATTTACCCGCGCTCACGTC
GCTAAATGAATGTATTTCGCTTTCGCTTATTGAAAATCGTCAAGTGGGTAACGATATTAAGCTTATCTTCCGTCCTGATG
TTAGCAACACCCGTGGTTAA

Protein sequence :
MNHDTVKNDYFWMAKAIQLAQQGRFTTSPNPRVGCVIVDENNHLLGQGYHIQAGTPHAEVHALRQASNARPQGAKGATAY
VTLEPCSHFGRTPPCAVALVEAKVARVVIAMTDPNPNVCGNGISILQEAGIEVVSEVMAAEAAALNPGFIKRMLTGKPFV
RVKLGISLDGKIALQNGVSQWITGAEARRDVQQYRAQSCVVLTGSGTVKADNPSLLVREQEAQFTNYPLEHIRQPARVVI
DGKSALSRGYALFNDGNLTLTATSQAHPDTATQHYLSVDEKDGKLNLHSLMSALGDKQYNEVWVEAGPGLAGALLQEGLV
DELICYQAPKLLGDKGVSMVNLPALTSLNECISLSLIENRQVGNDIKLIFRPDVSNTRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 3e-58 45
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 3e-58 45