Gene Information

Name : AMEC673_12625 (AMEC673_12625)
Accession : YP_006799588.1
Strain : Alteromonas macleodii English Channel 673
Genome accession: NC_018678
Putative virulence/resistance : Unknown
Product : ClpB protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2954609 - 2957185 bp
Length : 2577 bp
Strand : -
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGAGACTAGATAGATTTACCAGTAAATTTCAGCTCGCAATATCCGATGCTCAATCACTCGCATTGGGGCGAGATCATCA
ATACATTGAACCTGTCCATTTAATGACTGCCATGCTAAATCAGCAAGGCGGGTCAGTACGCCCTTTGCTTGACCAAGCAA
ACATCAATGTAAATGCGCTACGCTCAGCACTGAGCCAAGCTATTGAGCGCCTACCTCGTATTGAAGGCATTGGGGGAGAT
GTTCAATTAAGTAAAGACAGCGGCATTTTGCTAAATCTTTGTGACAAGATAGCGCAGCAGCGAAAAGACGAATACATCAC
TTCAGAAATCTTTGTTCTAGCGGCACTACAAGATAAAGGGCGCTTGGGGGAAATCCTCAAAAGCCTGAATATCACTAAAG
AAGCTATTGAAAGCGCAATAGACGACATGCGTGGTGGCCAGAAGGTCACGGATCCTAATGCTGAAGATGTACGTCAAGCG
CTTGAAAAATACACGACAGATTTAACCGAGCGAGCAGAACAAGGCAAGCTCGACCCGGTCATTGGTCGAGACGATGAGAT
TCGCCGAACTGTTCAAGTACTGCAGCGTCGAACCAAAAACAACCCAGTACTCATTGGTGAGCCGGGTGTGGGTAAAACGG
CTATTGTTGAAGGGTTGGCTCAGCGCATCATTAATGGCGAAGTGCCTGAGGGCTTAAAGAACAAGCGTGTTCTTGCCCTT
GATATGGGCGCGTTAGTGGCGGGAGCTAAATATCGCGGTGAGTTTGAAGAACGCCTTAAAGCAGTGCTTAATGAGCTGGC
TAAAGAAGAAGGCCGCGTGATCTTATTCGTTGACGAACTGCACACCATGGTAGGTGCAGGGAAGGGCGATGGAGCGATGG
ATGCAGGTAATATGCTTAAACCTGCGTTAGCCCGTGGTGAACTTCACTGCGTTGGTGCTACAACACTGGATGAATATCGT
CAGTACATTGAAAAAGACGCAGCACTTGAACGTCGTTTCCAAAAGGTATTAGTTGAAGAACCAAGCGTTGAAGACACTAT
TGCTATTCTGCGTGGCTTAAAAGAGCGCTATGAGCTCCATCACTCGGTAGATATTACTGATCCCGCTATCGTTGCAGCGG
CAAGTTTGTCGCATCGTTATATTAGCGACCGCCAATTGCCAGACAAAGCCATTGATCTTATAGACGAGGCTGCGTCTAGC
ATTCGATTGCAAATAGACTCCAAGCCCGAAGAGATGGATCGTCTTGAGCGTCGTATCATCCAGCTAAAATTGGAAGAGCA
AGCTCTGGCCAAAGAAACAGATGATGCGAGTCATAAGCGACTTGAGATGATTGAGTTAGAGCGTGAGCAAGCGGAAACCA
AGTACGCAGAGCTTGAGAAAGTGTGGCTGGATGAAAAAGACGCCATGCAGGGCACTCAAACCATCAAAGGGGAGCTTGAG
CAGGCTAAACTTGACTTGGAAATAGCGCGACGTGCATCTGATTTGAATCGCATGTCGGAACTTCAGTACGGCCGTATTCC
AGAGCTTGAAGCAAAGTTAGAGCAAGCGGCTGAAAACGAAACTCGCGAGACGACGTTACTCAAAAATAAAGTGACGGACG
TTGAAATTGCAGATGTGCTTTCGCGATGGACGGGTATACCTGTAGCGCGAATGCTTGAGGGTGAGCGTGAGAAGCTGTTG
CGTATGGAAGACGTACTTCACAAACGGGTTGTTGGACAAGAAGAAGCGGTTGAAGCGGTTTCAAACGCAATTCGCCGTTC
ACGTGCTGGGCTTGCGGATCCAAATCGACCTATTGGCTCATTCTTATTTTTAGGGCCAACTGGCGTGGGCAAAACTGAGC
TCTGCAAAGCCTTGGCAGGCTTTATGTTCGATACTGAAGATGCCATGGTGCGTATCGATATGTCAGAATTTATGGAAAAA
CACTCGGTAGCACGCTTAGTGGGTGCACCTCCTGGCTATGTTGGCTACGAGGAAGGTGGCTACTTAACCGAAGCGGTGCG
TCGCAAACCATACTCGGTCATTTTGTTGGATGAGGTTGAAAAGGCACATCCAGATGTATTCAATATTCTGCTTCAAGTAC
TAGATGACGGCCGGTTGACTGACGGACAAGGACGTACTGTAGATTTTAAAAATACCGTTGTGATCATGACGTCCAACTTA
GGTTCAGATATCATTCAAGATAAGCACAACGAAAGTCAGTATGACGATATGAAAGCGTCGGTAATGAGTGTTGTAGGGCA
ACACTTCAGACCGGAGTTCATCAACCGCGTCGATGATATTGTGGTATTCCATCCATTAGGGAAGGAGCAAATAAAATCTA
TTGCTAAAATTCAGCTTGCCTCGCTTCGCGCTAGGCTCGCAGAAAAAGGATATAAGCTTACTCTGTCTGCCGCGGCTATG
GATAAATTGGCGGACGCGGGCTTCGACCCAGTGTTTGGCGCACGTCCGCTTAAGCGAGCGATACAAGTGCAGGTGGAAAA
TCCACTCGCGCATCAATTACTCGCTGGCGAATTAATACCGGAATCAACCATTCGTATTGATGCAGATGACAGCGGACTTT
TCGTTGTCAGCAATTAA

Protein sequence :
MRLDRFTSKFQLAISDAQSLALGRDHQYIEPVHLMTAMLNQQGGSVRPLLDQANINVNALRSALSQAIERLPRIEGIGGD
VQLSKDSGILLNLCDKIAQQRKDEYITSEIFVLAALQDKGRLGEILKSLNITKEAIESAIDDMRGGQKVTDPNAEDVRQA
LEKYTTDLTERAEQGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLAL
DMGALVAGAKYRGEFEERLKAVLNELAKEEGRVILFVDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYR
QYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHSVDITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS
IRLQIDSKPEEMDRLERRIIQLKLEEQALAKETDDASHKRLEMIELEREQAETKYAELEKVWLDEKDAMQGTQTIKGELE
QAKLDLEIARRASDLNRMSELQYGRIPELEAKLEQAAENETRETTLLKNKVTDVEIADVLSRWTGIPVARMLEGEREKLL
RMEDVLHKRVVGQEEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALAGFMFDTEDAMVRIDMSEFMEK
HSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVVIMTSNL
GSDIIQDKHNESQYDDMKASVMSVVGQHFRPEFINRVDDIVVFHPLGKEQIKSIAKIQLASLRARLAEKGYKLTLSAAAM
DKLADAGFDPVFGARPLKRAIQVQVENPLAHQLLAGELIPESTIRIDADDSGLFVVSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-102 42