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Name : AMEC673_01045 (AMEC673_01045) Accession : YP_006797292.1 Strain : Alteromonas macleodii English Channel 673 Genome accession: NC_018678 Putative virulence/resistance : Virulence Product : mannose-sensitive agglutinin biogenesis protein MshE Function : - COG functional category : - COG ID : - EC number : - Position : 238044 - 239756 bp Length : 1713 bp Strand : + Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGCGACCTCGATTAAAGATGCGCCTTGGCGACTTACTCGTTCACGAAAACATTATCTCCAGTGAGCAGCTTGACAATGC GCTTGCGGCGCAGCGAACGTCAGGGCGCAAACTGGGGGATACACTTATCGATTTGGGCTTTATCGGCGAACCCCAGCTTC TTCGCTTCTTGGCACAGCAGCTAAATATTCCTTTCTTGGATATAACTCAGCGCCGTATAGACCCAGAGCAAGCTCAGCTT ATCCCAGAGACTTACGCACGTCGCTATCGTGCCTTGGTGTTAGAAGCGGACGACGATGAAGTGCTGCTGGGCATGAGCGA CCCAACGGACTTGGGAGGCTTAGACCAACTCGGCCCGTTAGTCGCTCCTCGAACCATTGAGCTGGCTATCGTGCAAGAGA ACCAAATGCTAGAGGCATTTGATTCTGTTTACCGCCGTACCCAGGACATTGCGTCGTTTGCTGAAAAACTAGGTGAAGAG TATGCAGACGAGGCTGATTTTGAGTTGTCAGCCCTTGATGACACCACCTCGGATGCCACGGTCGTTAAGCTACTTCACTC CATATTTGAAGATGCCGTTCAAGTTAGGGCATCAGATATTCACATCGAGCCCGATGAAAAAATCCTGCGCATTCGTCAAC GTGTCGACGGCGTTTTGCAAGAAAACACGCTCAACCAAGTGAAAATAGCGTCGGCGCTGGTACTACGACTCAAACTCATG TCTGGCTTGGATATCTCTGAAAAGCGTATTCCACAAGACGGGCGATTTAATATTAAAGTAAAAGGACACACCTTAGATGT GCGTGTGTCGACCATGCCAGTGGCCAACGGAGAAGCGGTAGTTATGCGTTTATTAGACCAGTCTGCTGGCCTACTAACGC TAGACCAAACCGGTATGCCCGATGCTATGGCAGAGAAATTTAGAGCTGCCATTAATCGTCCCCACGGTATGATCCTGGTA ACGGGGCCTACGGGTTCCGGTAAAACTACGACTCTGTATGGGGCACTTAGCGAACTCAATAAGCCTGACCTTAAAATCAT AACGGCTGAAGACCCCATTGAATACCGTCTACCGCGAATCAACCAAGTTCAGGTTAATGCCAAAATTGGGCTGGACTTTG CCGCCATTCTTCGCACTACGTTACGTCAAGACCCCGACATTATAATGGTGGGGGAAATGCGTGACCAAGAAACCGTAGAG ATTGGTCTTCGAGGTGCATTAACCGGCCACTTGGTATTAAGTACGCTTCACACCAACGACTCAGTAACCAGCGCTATTCG CCTTATCGATATGGGCGCGGCGCCGTATTTGGTTGCCACTTCATTACGAGGAGTGCTTGCACAGCGTCTGGTTCGTAGGG TGTGTGAAAACTGTAAAGAAGAAAAGCCTGCAACCGCCCAAGAACAAGCGTGGGTTGGCTTCTTGAAACCTGGATTAGCC GCTGCCACCTTCTACAAAGGGCGCGGGTGCAACAGCTGTAATCACACAGGATACAAAGGCCGGATAGGCGTTTTTGAATT TCTGGAAATGAACGAGGACATGATGGAGGCCTTGCGTGAAGACGACACGCAGGGCTTCGTAGATGCGACTAAGGCGAATA AAGACTTTGTTCCTTTATCTCACATGGCGCTGGACTACGCAGCTCAGGGCAAAACTTCTTTAGATGAAGTGTTCAAAGTC GCTGAATTCGTACCTGAAGTGGTGAATCACTAA Protein sequence : MRPRLKMRLGDLLVHENIISSEQLDNALAAQRTSGRKLGDTLIDLGFIGEPQLLRFLAQQLNIPFLDITQRRIDPEQAQL IPETYARRYRALVLEADDDEVLLGMSDPTDLGGLDQLGPLVAPRTIELAIVQENQMLEAFDSVYRRTQDIASFAEKLGEE YADEADFELSALDDTTSDATVVKLLHSIFEDAVQVRASDIHIEPDEKILRIRQRVDGVLQENTLNQVKIASALVLRLKLM SGLDISEKRIPQDGRFNIKVKGHTLDVRVSTMPVANGEAVVMRLLDQSAGLLTLDQTGMPDAMAEKFRAAINRPHGMILV TGPTGSGKTTTLYGALSELNKPDLKIITAEDPIEYRLPRINQVQVNAKIGLDFAAILRTTLRQDPDIIMVGEMRDQETVE IGLRGALTGHLVLSTLHTNDSVTSAIRLIDMGAAPYLVATSLRGVLAQRLVRRVCENCKEEKPATAQEQAWVGFLKPGLA AATFYKGRGCNSCNHTGYKGRIGVFEFLEMNEDMMEALREDDTQGFVDATKANKDFVPLSHMALDYAAQGKTSLDEVFKV AEFVPEVVNH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-84 | 43 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-84 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| AMEC673_01045 | YP_006797292.1 | mannose-sensitive agglutinin biogenesis protein MshE | VFG0182 | Protein | 5e-84 | 46 |
| AMEC673_01045 | YP_006797292.1 | mannose-sensitive agglutinin biogenesis protein MshE | VFG1876 | Protein | 2e-86 | 44 |
| AMEC673_01045 | YP_006797292.1 | mannose-sensitive agglutinin biogenesis protein MshE | VFG0233 | Protein | 1e-72 | 43 |
| AMEC673_01045 | YP_006797292.1 | mannose-sensitive agglutinin biogenesis protein MshE | VFG2048 | Protein | 3e-84 | 42 |
