Gene Information

Name : AMEC673_10350 (AMEC673_10350)
Accession : YP_006799141.1
Strain : Alteromonas macleodii English Channel 673
Genome accession: NC_018678
Putative virulence/resistance : Unknown
Product : seryl-tRNA ligase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.11
Position : 2435397 - 2436698 bp
Length : 1302 bp
Strand : -
Note : COG0172 Seryl-tRNA synthetase

DNA sequence :
ATGTTAGATCCAAAGTGTTTGCGAAGCGATATAGAACAAACAGCTAAGCGATTAGCTGCCCGTGGTTTTAACCTCGATGT
AGCAGCTTTCAGTTCGCTTGAAGAAAAAAGAAAAACACTTCAGTCCAGAACACAGGATCTGCAAAACGAGCGTAACGTAC
GAAGTAAATCCATAGGTAAAGCAAAAGCGCAGGGCGAAGATATTGCACCGCTATTGGCTGAAGTGGGTAAGCTTGGTGAC
GAGCTTGACGCCGCTAAAGCGGAACTTAGCGAACTGTTGGAAGAAATTAACACCCTTACGCAAGGCATTCCTAATTTGCC
ACACGAGTCTGTACCAGCGGGTAAAGACGAAGATGACAATGTTGAGATTTCTCGATGGGGCGAACCACGCACGTTTGATT
TTGAAGTTAAAGATCATGTTGATGTGGCTGAAGGCTTAAACAACGGCTTAGATTTCGCTACCGCAAGTAAGCTTACGGGA
AGCCGCTTTGTAGTGATGCGCGGCGATATTGCTCGCCTAAATCGTGCAATTGCTCAGTTCATGCTGGATACCCATACACA
AGAACATGGCTACCAAGAGATGTATGTGCCTTACTTGGTTAACGCTGACAGCCTTTATGGCACAGGTCAGTTGCCTAAAT
TTGGTGAAGACCTATTTCACACCAAGCCAGCAACTGAAGAAGGACAGGGGCTTAGCTTAATTCCAACGGCGGAAGTTCCG
CTAACTAATATTGCACGTGATGAAATATTAGATGCGAAAACGCTGCCTGTGAAAATGACTGCGCATACGCCTTGCTTCCG
CTCAGAAGCTGGTTCGTACGGTCGTGATACCCGTGGCCTTATTCGTCAGCATCAGTTCGACAAGGTAGAACTTGTACAGT
TAGTTAAGCCGGAAGATAGCTTTGACGCACTAGAAGCACTTACAGGACACGCAGAAGTTATTCTTCAAAAGCTAGAATTA
CCGTACCGCAAAGTGTTGCTTTGTACTGGTGATATGGGCTTTGGTGCATGTAAAACCTACGATCTTGAAGTATGGCTACC
TGCGCAAAATACCTATCGTGAAATTTCTTCATGTTCAAACATGTTGGACTTCCAAGCACGACGCATGCAGGCTAGATTCC
GTAACCCAGAAACGAATAAAACTGAACTTCTGCACACATTGAATGGTTCTGGTTTAGCGGTAGGGCGTACGCTTGTAGCT
ATTTTAGAGAACAATCAGCAAGCAGACGGAAGCGTTACGATTCCAAAGGCGCTTGTGCCTTATATGGCAGGCCAAGAGGT
TATCAAAGCGACTAGCGTGTAG

Protein sequence :
MLDPKCLRSDIEQTAKRLAARGFNLDVAAFSSLEEKRKTLQSRTQDLQNERNVRSKSIGKAKAQGEDIAPLLAEVGKLGD
ELDAAKAELSELLEEINTLTQGIPNLPHESVPAGKDEDDNVEISRWGEPRTFDFEVKDHVDVAEGLNNGLDFATASKLTG
SRFVVMRGDIARLNRAIAQFMLDTHTQEHGYQEMYVPYLVNADSLYGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVP
LTNIARDEILDAKTLPVKMTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPEDSFDALEALTGHAEVILQKLEL
PYRKVLLCTGDMGFGACKTYDLEVWLPAQNTYREISSCSNMLDFQARRMQARFRNPETNKTELLHTLNGSGLAVGRTLVA
ILENNQQADGSVTIPKALVPYMAGQEVIKATSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
serS YP_003446791.1 seryl-tRNA synthetase Not tested The aminoglycoside resistance gene cluster Protein 1e-105 57