Gene Information

Name : AMEC673_09560 (AMEC673_09560)
Accession : YP_006798983.1
Strain : Alteromonas macleodii English Channel 673
Genome accession: NC_018678
Putative virulence/resistance : Resistance
Product : D-lactate dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2247803 - 2248843 bp
Length : 1041 bp
Strand : -
Note : COG1052 Lactate dehydrogenase and related dehydrogenases

DNA sequence : 
ATGAATACCTCTGCACGTAAAAAAGCGCACGATAACCTCAGCGACCAACAACACAAAAACATCGCTTTTTTTAGTACTCG
CTCTTATGAACACGCTCTGTTTTCTGAATTGCTGGAAACATTAAACGGTGCTAGTGACAAAACCATCAATGCCACATTTT
TTGAACACCCACTGAACGCTTCAACCGCTGCGAGTTGCAGTGGATTCAGCGATGTTGTTGTGTTTGTAAATGACGACATT
AATAGGAAAACCATTGAAGCTCTAAAACTCTGTGGCGTTAAACATATCGCGCTTCGCTGCGCTGGCTTCAACAATGTTGA
TGTGGATGCAGCAGCAAAGGCAGGTATCACTGTAAGCCGCGTACCCGCTTATAGCCCTGAAACCGTAGCTGAACATACAA
TTGCGCTAATCCTTACGTTGAACCGAAAAACACATAAAGCATACAACCGAGTACGCGAAGGCAACTTCAATCTTGGAGGA
TTGATGGGCTTTACGCTTCACGGTAAAACCGTAGGGGTAATTGGCACAGGAAAGATTGGACAAGCGGTTATACGCATACT
ATTGGGATTTGGATGCCATGTGCTTTGCTTCGATCCGCATACAAACAATGATGTAACCACAATGGGAGCCCATTATGTAA
CGCTCAATGAACTACTTGAAAAAAGCGTTATTGTTACCCTGCACTGCCCGCTCAACGAACAGAGTCATCATATAATCAAT
GCGAAGAGTATTGATAAAATGCCTCAAGGCGTCATGCTAATTAATACGTCAAGAGGCGGGCTTGTCGATGACAATGCCAT
CATTAAAGGGCTTAAGTCGAAAAAAATTGGATATTTAGGGCTAGATGTCTACGAAAGAGAATCCGAACTGTTTTTTAACG
ATCATTCGCAAGACATAATTCAGGATGATATTTTTCAGCGCTTAACTACGTTTCCGAACGTTTTAATAACGGGCCACCAA
GGGTTCTTCACGCTCGAAGCCTTAGAGGAAATCGCAAAAATCACGGTCAATAATATTATGACGGGTGAGAACGCGCTCTA
A

Protein sequence : 
MNTSARKKAHDNLSDQQHKNIAFFSTRSYEHALFSELLETLNGASDKTINATFFEHPLNASTAASCSGFSDVVVFVNDDI
NRKTIEALKLCGVKHIALRCAGFNNVDVDAAAKAGITVSRVPAYSPETVAEHTIALILTLNRKTHKAYNRVREGNFNLGG
LMGFTLHGKTVGVIGTGKIGQAVIRILLGFGCHVLCFDPHTNNDVTTMGAHYVTLNELLEKSVIVTLHCPLNEQSHHIIN
AKSIDKMPQGVMLINTSRGGLVDDNAIIKGLKSKKIGYLGLDVYERESELFFNDHSQDIIQDDIFQRLTTFPNVLITGHQ
GFFTLEALEEIAKITVNNIMTGENAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF2295 NP_815952.1 D-specific alpha-keto acid dehydrogenase Not tested Not named Protein 3e-41 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMEC673_09560 YP_006798983.1 D-lactate dehydrogenase NC_005054.2598279.p0 Protein 4e-42 43
AMEC673_09560 YP_006798983.1 D-lactate dehydrogenase AF155139.2.orf4.gene Protein 4e-42 43
AMEC673_09560 YP_006798983.1 D-lactate dehydrogenase NC_014475.1.orf2.gen Protein 4e-42 43
AMEC673_09560 YP_006798983.1 D-lactate dehydrogenase U35369.1.gene5.p01 Protein 2e-41 41