Gene Information

Name : smpB (AMEC673_08450)
Accession : YP_006798761.1
Strain : Alteromonas macleodii English Channel 673
Genome accession: NC_018678
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2009885 - 2010364 bp
Length : 480 bp
Strand : -
Note : COG0691 tmRNA-binding protein

DNA sequence :
ATGAAAAAGAATAAAGCCAACAAAAACACCACAGGAAATATCGCGCAGAATAAAAAAGCGCGTCACGACTATTTCCTAGA
AGACAAGTTCGAAGCCGGACTTGAGCTTCAAGGGTGGGAAATTAAAAGTATTCGTGCCGGTAAAGTGAACATTACCGATG
CGTACATTATTATCCAGAATGCCGAAGCGTATTTGGTAGGGTGTAGAATTAGTCCGCTGAATCAAGCCTCTACCCACGTT
ATCGCTGCTCCAGAGCGTGCTCGCAAATTGTTGCTGAACAAACGAGAAATTGACCGCTTAATGGGTGCACGAGACCGCCA
AGGTTATTCAATTGTTGCCACGTCTATGTATTGGAAAAAGTGTTGGGTGAAACTAGAAATTCACCTAGCAAAAGGTAAGC
ACGCCCATGACAAGCGTGACACCATTAAAGACAAAGATTGGCAACGTCAAAAAGAACGAATGATGAAACACAGCGTTTAA

Protein sequence :
MKKNKANKNTTGNIAQNKKARHDYFLEDKFEAGLELQGWEIKSIRAGKVNITDAYIIIQNAEAYLVGCRISPLNQASTHV
IAAPERARKLLLNKREIDRLMGARDRQGYSIVATSMYWKKCWVKLEIHLAKGKHAHDKRDTIKDKDWQRQKERMMKHSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 7e-43 58
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 7e-22 46