Gene Information

Name : C270_04655 (C270_04655)
Accession : YP_006795841.1
Strain : Leuconostoc carnosum JB16
Genome accession: NC_018673
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 965043 - 965927 bp
Length : 885 bp
Strand : -
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
ATGGATAATGCGATTGTCGATTATTTGCACTATATTCGGATTGAACGTGGTTTGTCAGAAAATACGATCAAGAGTTATCG
GCAAGATTTGCAACAATTTAATGCTTATGCGACACAAGAGAAATGGTCATTAAATGATATTGACCACTTCTTGATTTTGG
CGTGGTTAAATCAGTTACAAATTCTTGGTAAATCAAATAATTCTGTTATACGTATGGTAACTGCTTTACGAAAGTTTTTC
GGCTATTTATCGCAAGAGCAACTCATCTTACACAATCCAATGATTGATGTCAAACCGCCAAAAAAATCATCTCATCTACC
TGCAGTATTAACAGTGGCAGAGATTGATGCGCTATTACAAGTGTCGATTGAGCAAACGGCCCTAGGTATACGTAATCGTA
CACTCCTAGAAGTCATGTATGCTACGGGGCTTCGTGTGAGTGAACTTGTCAATTTAAAAATGAGTGACTTACATTTGCAG
CTGGGGTTAATTCAAACCATAGGTAAAGGTGATAAAGAGCGTATTATTCCGATTGGGGATGTGGCTTCAGAGTGGTTAGA
AAAGTATTTTTCTGGTAGCCGTTTGGCTTTGCTAAAAGAGCGTGAGTCGGATTTTGTATTCTTAAATGATCGTGGGAATC
AATTAACGCGGCAAGGTGTCTGGAAAATTATTAAAAAATTAGTTTTGGAAGCCGGTATCACCAAAAATGTTTCACCGCAT
ACCTTGCGACATTCATTTGCTACTCATATATTAGAGAACGGCGCTGATTTACGTATCGTACAGGAATTATTAGGACATGC
TGATATTTCCACAACACAAATATATACCCATATTTCTAAAAAGCGATTAAGTGAAGTTTATGATAATTTTCATCCAAGAG
CTTAA

Protein sequence :
MDNAIVDYLHYIRIERGLSENTIKSYRQDLQQFNAYATQEKWSLNDIDHFLILAWLNQLQILGKSNNSVIRMVTALRKFF
GYLSQEQLILHNPMIDVKPPKKSSHLPAVLTVAEIDALLQVSIEQTALGIRNRTLLEVMYATGLRVSELVNLKMSDLHLQ
LGLIQTIGKGDKERIIPIGDVASEWLEKYFSGSRLALLKERESDFVFLNDRGNQLTRQGVWKIIKKLVLEAGITKNVSPH
TLRHSFATHILENGADLRIVQELLGHADISTTQIYTHISKKRLSEVYDNFHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-56 41
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-56 41