Gene Information

Name : C270_04055 (C270_04055)
Accession : YP_006795721.1
Strain : Leuconostoc carnosum JB16
Genome accession: NC_018673
Putative virulence/resistance : Unknown
Product : oligo-1,6-glucosidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 845401 - 847071 bp
Length : 1671 bp
Strand : +
Note : COG0366 Glycosidases

DNA sequence :
ATGACAAAGCAGTGGTTTAAGGACTCAGTAGTTTATCAAATATATCCTATGAGTTTTCAGGATAGTAATAATGATGGTAT
CGGTGATTTGAATGGTATTAAACAACGTTTACAATATATTCATCATTTAGGCGCAGATGTAATTTGGTTAAATCCAATTT
ATGTTTCACCAAATAAAGATAATGGTTATGACATTGCGGATTACAAAAACATTAATCCAAACTATGGCACGATGCAAGAT
TTTGAAGAATTATTGCAACAAGCTCACCAACTTAATCTTAAAATTATGATGGATTTAGTTGTCAATCATACATCTGATCA
GCATGCATGGTTTAAAGAAAGCCGTACCAGTCAAGATAATCAATATGCAGATTACTATATTTGGAGAGATCCTGTTGACG
GTCATGAACCAAACAATTGGCTAGCAGCATTCGGTGGCTCAGCCTGGACTTATGTTCCTGAACGAAAACAGTACTATTTG
CACATTTTTGCCGAAAGCCAACCAGATCTTAATTGGGAAAATCCAGAAGTACGCGAAGCCGTGTTTGATATTGAACGTTT
CTGGTTAAACAAAGGTGTTGACGGCTTCCGTATGGATGTTATCAACTTAATCTCAAAGCCTGAAGGCTTACCAGATGTTC
CTGCACCCGTAACATCTGGCACAACAATGGATTTTGTGGCCGATGGTCATCGCTTAAATGAATTCTTACGACAGATGAAT
GATGAAGTCTTATCTAAGTATGACACCATTACCGTTGGTGAGATGCCTGGTGCTACACCCGATGATGCGATTAAATATAC
TGGGTTGAATAGCCATGAATTAAATATGGTCTTCCAATTTGAACATGTCGCATTAAGTCCTAATCCGGATGTTCGCATGG
GTAAATGGAATGATGAACCTGTTAAATTAGTTGAATTGAAACAATCGTTAAATCGCTGGCAAACAAGTCTTGATGGTAAA
GGTTGGAACAGTCTCTATTGGAATAATCATGACCAACCTCGTGCAGTATCCCGCTTTGGAAACGATTCAAATGAATTTAG
AGATGTGTCAGCAAAAATGTTAGCTACTACCTTGCACATGATGCAAGGTACGCCTTATATTTATGAAGGTGAAGAATTAG
GCATGACCAATGGCCATTTTACTAAATTGGAGCAATATGAAGATATTGAATCAATTAATTTCTATGATGAGCTAGTCAAT
CAAAAACACATCGTCGATTCAGAGCTCATGCTAAAATATTTAACCATTATGTCGCGTGATAACGCTAGAACACCCATGCA
ATGGAATGAAGAAATCAACGCTGGTTTCTCAACAGCAACACCTTGGTACGCGCCAAATAATAATTACACCGAAATCAATG
CTGAAAAATCTCTATCTGATAAAACTTCTGTATTTTATCACTATCAAAAGCTAATTCAGCTTCGTCATGATTCAGAAATA
ATTAGATACGGTACGTTTGAACCAATTGACTTTGATGATGACCAAGTTTATGCTTATCGCCGTCACTATGAAGGTCAAAC
AATACTTGTTTTAAGTAACTTTACCGATAAAACCATTACACGTGATTATCAACAATTAGACGCAGACGAATTATTGATTA
GTAATTATACCGATGACCAAGGAAACACTTTACGTCCATATGAAAGTAAAGTATATCTTTTTAAAAAATAA

Protein sequence :
MTKQWFKDSVVYQIYPMSFQDSNNDGIGDLNGIKQRLQYIHHLGADVIWLNPIYVSPNKDNGYDIADYKNINPNYGTMQD
FEELLQQAHQLNLKIMMDLVVNHTSDQHAWFKESRTSQDNQYADYYIWRDPVDGHEPNNWLAAFGGSAWTYVPERKQYYL
HIFAESQPDLNWENPEVREAVFDIERFWLNKGVDGFRMDVINLISKPEGLPDVPAPVTSGTTMDFVADGHRLNEFLRQMN
DEVLSKYDTITVGEMPGATPDDAIKYTGLNSHELNMVFQFEHVALSPNPDVRMGKWNDEPVKLVELKQSLNRWQTSLDGK
GWNSLYWNNHDQPRAVSRFGNDSNEFRDVSAKMLATTLHMMQGTPYIYEGEELGMTNGHFTKLEQYEDIESINFYDELVN
QKHIVDSELMLKYLTIMSRDNARTPMQWNEEINAGFSTATPWYAPNNNYTEINAEKSLSDKTSVFYHYQKLIQLRHDSEI
IRYGTFEPIDFDDDQVYAYRRHYEGQTILVLSNFTDKTITRDYQQLDADELLISNYTDDQGNTLRPYESKVYLFKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 3e-160 57