Gene Information

Name : C270_01635 (C270_01635)
Accession : YP_006795245.1
Strain : Leuconostoc carnosum JB16
Genome accession: NC_018673
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 348559 - 349314 bp
Length : 756 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGACAGAGAAAAGTATTATTCAAGTTAAAAACTTATCTAAGCGATATGACAACAATAACCAAATTTTAGAGGGGATTGA
TTTAGAAATTTTTGAATCGACTTTCACCGTGATTATGGGACCTTCAGGTGCGGGCAAGTCAACGCTATTACAAAACATAT
CAACTATGGATCAGCCGACAAGTGGGCAAGTGGTTTTTGAAGCACAAGATTTAACCAAACTTTCTGATAAAGCTTTATCA
AGATTTAGACGCAAAGAAATTGGTTTTATTTTTCAATCATTTAACCTGATTGAACATTTGAGCGTGTTAGAAAATGTGTG
TCTGCCAGGATTCCTATTGAAATCAAAATCTAAAAAGCAAGTGATACAACGTGCCAAAGATTTGCTTACTGGATTGGGAT
TAGGAGACCATGCTAATCAAGCAATTAATCATTTATCGGGTGGACAAAAGCAACGTGTGGCGATTGCTAGAAGTCTGATT
AATCAACCGAAAATTCTTTTTGCAGATGAACCAACAGGGGCCTTGGACTCAACTTCTGGTATAGAAGTACTAGATAATCT
CACTTTAAATAATCAAAACGGGCAAACAATTGTCATGGTCACGCATGATCTAAAGGCAGCACTTCGTGCTGATAGAATTT
TATTCATAAAAGATGGGCAGATTTATGGTGACCGTATTTTTACACCTTATGACGCTAGCCAACTCAAAGCTAGGCGATCA
GAAGTTGAAGCTTGGCTACTAGAGATGGGGTGGTAA

Protein sequence : 
MTEKSIIQVKNLSKRYDNNNQILEGIDLEIFESTFTVIMGPSGAGKSTLLQNISTMDQPTSGQVVFEAQDLTKLSDKALS
RFRRKEIGFIFQSFNLIEHLSVLENVCLPGFLLKSKSKKQVIQRAKDLLTGLGLGDHANQAINHLSGGQKQRVAIARSLI
NQPKILFADEPTGALDSTSGIEVLDNLTLNNQNGQTIVMVTHDLKAALRADRILFIKDGQIYGDRIFTPYDASQLKARRS
EVEAWLLEMGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-33 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-33 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-33 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C270_01635 YP_006795245.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 8e-39 44
C270_01635 YP_006795245.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-36 43
C270_01635 YP_006795245.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-32 43
C270_01635 YP_006795245.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 6e-35 42