|
Name : C270_00710 (C270_00710) Accession : YP_006795060.1 Strain : Leuconostoc carnosum JB16 Genome accession: NC_018673 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 171958 - 174438 bp Length : 2481 bp Strand : + Note : COG0542 ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGGATAACAATTATACAGCAAGTGCACAAAATGTATTAGTTTTGGCTCAGGAACAAGCAAAGTACTTTAAGCATCAAGC AGTTGGGACAGAACACCTATTACTTGCCTTAGCAATCGAAAAAGAAGGGATTGCTAGCAAAATATTAGGACAGTTCAATA TTGCAGATGATGACATACGTGAAGAAATTGAGCACTTTACGGGCTATGGCATGACTTCACGCTATGATAAAAATAGTTAC TTACCTTACTCACCTAAGGCAGCAGATATTTTACGACAAGCAGGTGAAGAGTCACAGGCTTTGGCACAACCAACAGTCGG GACAGAACATATTTTGCTCGCTTTACTACAAGACGAAAGTATTTTGTCATCACGAATTTTATTAGCGTTGGATGCTAATT TACAAGATATGCGACGTGCTGTTTTACGTAAATTAGGTATTACGGACGTCCGCAAGCAGATGAAACAACGTACGAAACAG CAACAGACTCAAGGAACACCGACTTTAGATGGGTTAGCGCGTGACCTGACACAAATAGCTAGCGAAGGCAATATGGATCC GATTATTGGACGTGCAAAAGAAGTACGTCGAGTGATTCAAATTTTATCACGCCGCACCAAAAATAATCCAGTGTTAATTG GAGAACCTGGTGTCGGTAAAACAGCGATTGCCGAAGGATTGGCACAAAAAATTATAGCTGGTGAGGTACCTAGTGCTCTA CAAGGTAAGCGAGTAATGGCATTAGACATGGGATCATTAGTAGCTGGTACGAAGTATCGTGGTGAGTTTGAAGATCGTTT GAAAAAAATCATTGAAGAAATATATAATGATGGAAAAGTTATTTTATTTATTGATGAATTACACACTTTAATTGGTGCTG GTGGTGCTGAAGGCGCTATTGATGCGTCAAATATACTAAAGCCTGCTTTGGCACGTGGAGAATTACAAACATTAGGTGCG ACAACTTTTGATGAGTATCAAAAGTATATTGAGTCAGATGCTGCATTAGAAAGGCGATTTGCTTCAGTGACAGTTGAAGA ACCTTCACAAGAAGATGCTATTGCTATTTTAACTGGGATTCGGCCAAAATTTGAAGCACATCATCAAGTTCAAATTGATG ATGAAGCGGTTAAAGCTGCTGTTAAATTGTCATCTCGTTACATCACAGATCGTTTTTTGCCGGATAAAGCGATTGATTTG ATTGATGAAGCTGGGGCTAAAGTTCGTATTGATGCCTCTGATCAGCCCAAACCTATCAATAAAAAGGTAGCGCATTTAGA AGGAATTTCGGCTGCTAAAGATGCTGCTATTGCAGCGCTTGATTTTGAAGAGGCGGCACGTTTGAGAAAGCAAGAAGGCA AGTTGCAAACTCAAATTGCTCGAGCAGAGGCAAAAAAGGCTGCAAACGATGCTAATTCAGATCAACCACAATACAGCTTA CATGTTACCGAGGAAGATATTGCTGAGGTAATCTCACAACAAACAGGCGTTCCGTTGACGCAGCTTGAAAAAAATGAGCA ACAACGACTAGTTAATCTAGAGGATGTTTTAGGACGTCGAGTTGTTGGTCAAAAAGAGGCAGTTTCAGCCGTGGCACGTG CCATTCGTCGTGCGCGTTCTGGCTTAAAAGATCCCAATCGACCTATTGGAACATTTATGTTTTTAGGACCAACTGGGGTT GGTAAAACAGAATTAGCTAAGGCGCTAGCTGAGGCAATGTTTGGTAGTGAGGATAATATGGTCCGCATTGATATGTCAGA ATATCAAGAGCGTTGGTCATCTTCACGTTTAATTGGTTCGGCACCTGGTTATGTTGGTTATGATGAGGGTGGACAATTGA CTGAACAGGTACGTAATCACCCATATTCTGTTATTTTGTTAGATGAAGCGGAAAAAGCGCATCAAGATATCTTTAATCTC ATGTTACAAGTATTTGATGATGGCTATTTGACAGATTCTAAGGGGAGAAAAGTTGATTTTAGAAATACAATCATTATTAT GACTTCTAACTTAGGTGCAACACGCTTGCGTGATGAAAAATCTGTTGGATTTGGGGCTGTTGATTTAAAAAATGATAGTG AAGCAGTTGCTGAAAAGATTCGTGAAACATTAAAAGAAACATTCAGACCAGAATTTATTAACCGGTTAGACGAAACAATT GTGTTTAAATCATTAACCAAAGAAGAATTACATGAAATTGTGAAGTTGATGAGTCGTTCGGTATTACAACGTGTGGCAGA ACAAGGGATTTCAGTGAAAATTACACCGGCAGCAATTGATGTTGTTGCGAGTGCAGGATTCGATCCGGAGTATGGTGCGC GTCCAATTCGTCGTACGTTACAGACAAAAATCGAAGATGTATTGAGTGAAGAATTATTGCAAGGTAATATTACTACGGAA AGTGCAGTCACTATTGGCGCTAGAAATGGTGAAATTAAAGTTACTATTAAGCCCGTTAAAAAGGCATCTGCAAAATCATA A Protein sequence : MDNNYTASAQNVLVLAQEQAKYFKHQAVGTEHLLLALAIEKEGIASKILGQFNIADDDIREEIEHFTGYGMTSRYDKNSY LPYSPKAADILRQAGEESQALAQPTVGTEHILLALLQDESILSSRILLALDANLQDMRRAVLRKLGITDVRKQMKQRTKQ QQTQGTPTLDGLARDLTQIASEGNMDPIIGRAKEVRRVIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQKIIAGEVPSAL QGKRVMALDMGSLVAGTKYRGEFEDRLKKIIEEIYNDGKVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQTLGA TTFDEYQKYIESDAALERRFASVTVEEPSQEDAIAILTGIRPKFEAHHQVQIDDEAVKAAVKLSSRYITDRFLPDKAIDL IDEAGAKVRIDASDQPKPINKKVAHLEGISAAKDAAIAALDFEEAARLRKQEGKLQTQIARAEAKKAANDANSDQPQYSL HVTEEDIAEVISQQTGVPLTQLEKNEQQRLVNLEDVLGRRVVGQKEAVSAVARAIRRARSGLKDPNRPIGTFMFLGPTGV GKTELAKALAEAMFGSEDNMVRIDMSEYQERWSSSRLIGSAPGYVGYDEGGQLTEQVRNHPYSVILLDEAEKAHQDIFNL MLQVFDDGYLTDSKGRKVDFRNTIIIMTSNLGATRLRDEKSVGFGAVDLKNDSEAVAEKIRETLKETFRPEFINRLDETI VFKSLTKEELHEIVKLMSRSVLQRVAEQGISVKITPAAIDVVASAGFDPEYGARPIRRTLQTKIEDVLSEELLQGNITTE SAVTIGARNGEIKVTIKPVKKASAKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 5e-169 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| C270_00710 | YP_006795060.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 0.0 | 56 |
| C270_00710 | YP_006795060.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 5e-136 | 50 |
