Gene Information

Name : C270_06805 (C270_06805)
Accession : YP_006796269.1
Strain : Leuconostoc carnosum JB16
Genome accession: NC_018673
Putative virulence/resistance : Virulence
Product : metal ion ABC transporter substrate-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1424826 - 1425767 bp
Length : 942 bp
Strand : -
Note : COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin

DNA sequence :
ATGATTAAACGTCTAGGTATTATTATTATTGCAGTGGCGGTTATTTTGGGTGGCGTATTCTGGTTTGTTAACAGTAGCCA
AGGTGGTAAAACAAGTCAACACGATAAGATTCAAGTTGTTGCCACGAATTCAATTATAGGAAATATGGTTGAAGAAATTG
CTGGCGATAAAGTAACACTGCACACGATTGTGCCACGCGGAACAGATCCTCATGAATATGAACCACGACCACAAGATGTT
CAAGCCACACAAGAAGCCGATATTTTGTTCCATAATGGGTTAAATCTTGAGACAGGCGGATCCGGTTGGTTTAAAAAAAT
GTATCAAAACGCTGGTAAAGCCGATAATAAAGAAGTATTTTCTGTCTCAGAAGGTGTGCAAGCTAAGCACTTAACAGACA
AAGGAAAAGAAAATGAATTGGATCCTCATGCTTGGTTAGATATACAAAACGGTATTAAGTATGTTAAAAATATTGAAAAA
ATATTAATTGACAAGGATCCTGATAATACTAAAACATATCAACAACGTACCAAGGCATATATTAACAAATTATCTGAGTT
AGATAAGTCAGCGAAGACGAAATTCAACAATATTCCTGAAAATAAGAAATTATTGGTGACATCTGAAGGTGCATTCAAGT
ACTTCTCAGCTGCTTACGGTATTACACCAGCTTTCATCTGGGAAATCAATACAGAGTCACAAGGTACACCAGAACAAATG
CGAAATGTATTAGCTAAAATCCGTGCAACAAAGGTACCATCATTGTTTTTGGAAAGTTCAGTATCGCCTAAGACGATGGA
GAAAGTATCAAAGGAAACTGGCTTACCAATCTATTCTAAGATTTATACTGATTCATTAGCTAAGAAAGGTCAAGCAGGAG
ACACTTACTACGGCATGATGAAGTGGAACTTGGATAAGATTTCTGCAGGTTTGTCAAAATAA

Protein sequence :
MIKRLGIIIIAVAVILGGVFWFVNSSQGGKTSQHDKIQVVATNSIIGNMVEEIAGDKVTLHTIVPRGTDPHEYEPRPQDV
QATQEADILFHNGLNLETGGSGWFKKMYQNAGKADNKEVFSVSEGVQAKHLTDKGKENELDPHAWLDIQNGIKYVKNIEK
ILIDKDPDNTKTYQQRTKAYINKLSELDKSAKTKFNNIPENKKLLVTSEGAFKYFSAAYGITPAFIWEINTESQGTPEQM
RNVLAKIRATKVPSLFLESSVSPKTMEKVSKETGLPIYSKIYTDSLAKKGQAGDTYYGMMKWNLDKISAGLSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 5e-83 57
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 4e-83 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C270_06805 YP_006796269.1 metal ion ABC transporter substrate-binding protein VFG2165 Protein 6e-83 58
C270_06805 YP_006796269.1 metal ion ABC transporter substrate-binding protein VFG1359 Protein 1e-81 56
C270_06805 YP_006796269.1 metal ion ABC transporter substrate-binding protein VFG2157 Protein 3e-81 55