Gene Information

Name : BUPH_00158 (BUPH_00158)
Accession : YP_006794901.1
Strain :
Genome accession: NC_018672
Putative virulence/resistance : Virulence
Product : type III secretion protein SctR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2693680 - 2694330 bp
Length : 651 bp
Strand : +
Note : identified by sequence similarity; putative

DNA sequence : 
ATGGTCCAGTTCAGTGACATCACGGGACTGTTGATCGTCATCGTTGCGATCAGCCTCGTGCCTTTCGTCGCGATGGTCGT
CACCTCGTACGCGAAGATCGTCGTCGTGCTCGGTCTGCTGCGCAATGCGCTCGGCGTGCAGCAGGTGCCGCCCAACATGG
TGCTCAACGGCGTCGCGATTCTCGTGTCGCTCTACGTGATGGCGCCGGTCGGCATGCAGGCCATGCAGTCCATGCAGGGG
CAGGCCATTGCCGGCCAGCCCACTCAGGCGTTGATCCAGGTGTTCAGCACCGCGCGCGAACCGTTCCGCACGTTCTTGCA
GAAGCACACGAACGAACGCGAGAAACGCTTCTTCATCCGCTCGGCGAACGTGGTGTGGCCGAAGGACGCCGCCGCCAGCC
TGCACGAGAACGACCTCATCGTGCTCGCGCCCGCCTTCACGCTGACCGAGTTGACCGACGCGTTCAAGATCGGCTTTCTG
CTCTACATCGCCTTTATCGTCATCGACCTGATCATCGCCAATGTGCTGCTCGCCATGGGTCTGAACCAGGTGACGCCGAC
CAACGTGGCCATTCCGTTCAAGCTGCTGCTGTTCGTCGTGATGGACGGCTGGTCGACTCTGATTCACGGCCTCGTGATGA
CCTATCGCTAG

Protein sequence : 
MVQFSDITGLLIVIVAISLVPFVAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGVAILVSLYVMAPVGMQAMQSMQG
QAIAGQPTQALIQVFSTAREPFRTFLQKHTNEREKRFFIRSANVVWPKDAAASLHENDLIVLAPAFTLTELTDAFKIGFL
LYIAFIVIDLIIANVLLAMGLNQVTPTNVAIPFKLLLFVVMDGWSTLIHGLVMTYR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 7e-63 70
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 2e-62 69
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 2e-65 67
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 4e-66 67
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 2e-65 67
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 5e-66 67
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 5e-66 67
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 6e-66 67
lscR AAO18040.1 LscR Virulence TTSS locus Protein 2e-44 49
hrcR NP_791222.3 type III secretion protein HrcR Virulence Hrp PAI Protein 3e-31 43
hrcR AAG33884.1 HrcR Virulence Hrp PAI Protein 1e-31 43
unnamed AAL06354.1 EscR Virulence LEE Protein 1e-35 43
hrcR AAB06005.2 HrcR Virulence Hrp PAI Protein 1e-36 42
escR YP_003223490.1 T3SS structure protein EscR Virulence LEE Protein 4e-37 42
escR YP_003232138.1 type III secretion system protein Virulence LEE Protein 4e-37 42
escR AAC31528.1 L0049 Virulence LEE Protein 3e-37 42
escR ACU09473.1 type III secretion system protein EscR Virulence LEE Protein 3e-37 42
escR AAK26700.1 EscR Virulence LEE Protein 3e-37 42
escR AAL57527.1 EscR Virulence LEE Protein 3e-37 42
ECs4583 NP_312610.1 type III secretion system protein Virulence LEE Protein 1e-36 42
escR CAC81847.1 EscR protein Virulence LEE II Protein 3e-37 42
escR YP_003236103.1 T3SS structure protein EscR Virulence LEE Protein 4e-37 42
escR CAI43889.1 EscR protein Virulence LEE Protein 3e-37 42
escR NP_290283.1 type III secretion system protein Virulence LEE Protein 4e-37 42
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 2e-35 42
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-35 41
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-35 41
hrpW AAB05075.1 HrpW Virulence Hrp PAI Protein 3e-30 41
hrcR ABQ88359.1 HrcR Virulence Hrp PAI Protein 3e-30 41
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 1e-30 41
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 1e-30 41
escR AAC38369.1 EscR Virulence LEE Protein 3e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BUPH_00158 YP_006794901.1 type III secretion protein SctR VFG0188 Protein 9e-49 49
BUPH_00158 YP_006794901.1 type III secretion protein SctR VFG0394 Protein 3e-48 48
BUPH_00158 YP_006794901.1 type III secretion protein SctR VFG0044 Protein 3e-44 46
BUPH_00158 YP_006794901.1 type III secretion protein SctR VFG0827 Protein 1e-37 42
BUPH_00158 YP_006794901.1 type III secretion protein SctR VFG0715 Protein 1e-36 41