Gene Information

Name : O3K_26212 (O3K_26212)
Accession : YP_006792568.1
Strain :
Genome accession: NC_018666
Putative virulence/resistance : Virulence
Product : Chaperone protein Agg3D
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 21619 - 22248 bp
Length : 630 bp
Strand : -
Note : COG3121 P pilus assembly protein, chaperone PapD

DNA sequence : 
ATGCTTTATAAGCCGAATTCTTCTGGAGAAACATTGGCAGTTATTAATGAACATAACTATCCTATATTAGTCCAAGCGAA
TGTATTATCAGAGGATCAAAAAAATATTGCACCTTTTATAATTACACCTCCGTTATTTCGACTTGATGCTCTACAATCAA
GCCGCCTTCGTATTGTCAAAACAGAAGGAGCTTTTCCAATAGATCGTGAAAGTCTACAATGGATCTGTGTAAAGGCGATT
CCTCCAAAATATGAGGACAAATGGGCTAAAGAAGAAGTTAGCGGAAAAAAATCAGATGAAGCAACTATGAATATACAAGT
TTCAGTAAGCAGTTGCATTAAACTATTCGTTCGTCCGGCAGATGTGAAAGGGCAACCAGATGATGTAGCAGGAAAAATTA
AGTGGCAAAAAGTCGGAAATAAATTAAAAGGAGTAAACCCAACGCCATTCTATATGGACATTGCTGAGTTGAGAGTAGGT
GAAAAAGAAATAACTGAAACCCATTATATAGCTCCTTTTTCTTCTTACGAATATCCGATGCCTGTAAATGGGGGGGGGGA
CGTCCGATGGAAAGTGGTGACTGATTACGGTGGTATTAGTAAAACATTTGAAACAGGGCTTAATATTTAA

Protein sequence : 
MLYKPNSSGETLAVINEHNYPILVQANVLSEDQKNIAPFIITPPLFRLDALQSSRLRIVKTEGAFPIDRESLQWICVKAI
PPKYEDKWAKEEVSGKKSDEATMNIQVSVSSCIKLFVRPADVKGQPDDVAGKIKWQKVGNKLKGVNPTPFYMDIAELRVG
EKEITETHYIAPFSSYEYPMPVNGGGDVRWKVVTDYGGISKTFETGLNI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 2e-66 61
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 2e-66 61
safB NP_454906.1 periplasmic fimbrial chaperone protein Not tested SPI-6 Protein 1e-49 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3K_26212 YP_006792568.1 Chaperone protein Agg3D VFG0850 Protein 3e-96 99
O3K_26212 YP_006792568.1 Chaperone protein Agg3D VFG0943 Protein 7e-64 67
O3K_26212 YP_006792568.1 Chaperone protein Agg3D VFG0858 Protein 5e-71 66
O3K_26212 YP_006792568.1 Chaperone protein Agg3D VFG0852 Protein 6e-68 64