|
Name : Eab7_1139 (Eab7_1139) Accession : YP_006790885.1 Strain : Exiguobacterium antarcticum Eab7 Genome accession: NC_018665 Putative virulence/resistance : Unknown Product : transposase IS4 family protein Function : - COG functional category : - COG ID : - EC number : - Position : 1167477 - 1169060 bp Length : 1584 bp Strand : + Note : - DNA sequence : ATGTTTAAAAATTATAACATGAACCAGCTGGTTCTGCCTTTAGATTTAGAAATTCGTCTTCATGAAAATGATATCGCATT CGCCGTCCATCATCTTGTCGAGTCCATTCCCGACGAGGCCTTTGAACCATTTACTCGAACGACAGGCTGCCCTGCCTATC ATCCTCGCATGATGATGAAGATCATTTTATGCGCCTATACGCAATCGGTCTTCTCTGGTCGGAAGATCGAAGGACTCCTT CAAGACAGTCTACGGATGATGTGGCTCGCTCAGGGGAATGAACCGAGCTATCGTACGATCAATCGTTTTCGAGTGCACCC GGCAGTCACACCTATTCTGAAGCAGGCATTCGTCACCTTCCGTTGCCATCTCGTCGAGATGGGAGAAATTAAGGAAGAAG CGATCTTCATTGATGGTACGAAACTAGAAGCGAATGCGAATCGATATACGTTCGTCTGGCGGAAATCCGTCGAGCGATAT AGTGCGTCGCTCGTTGAAAAGTCTAATCTTCTCTATGAAGAACTCGTCGCGCAGGAAATTTTGCCGGAGATTGAACGGGA AAGTCCAGACGAACTGACCATTCCTGAACTCGAGCACATCGGTGATGTTTTGGAGGAACGAATCGCTTCTATTAATCAAG AAATCGAGACAAGTTCAGATACGCAGGAGAGAAAACGTCTTCGTTCCGAACGAAAGCAGCCCCATCTTTTCCGAAAAAAG GTCGCTGAATTCGTGGAAAGAAAACGGAAGTATGCCGTCCATAAGGAAACGTTCGATGGACGGAACAGCTATTCCAAAAC GGATACGGATGCGACGTTTATGCGGATGAAAGAAGATCATATGCAAAATGGACAACTCAAGCCTGGGTACAACGTGCAGA TTGCGACCGAAGGTCAATATACCCTCGCTTATGATATCTATCCTAATCCGACAGATGCCCGCACGTTAATTCCATTTTTA GATGAAGTGGCCTCGTATCTTACTTTACCGGAACATATCGTTGCGGATGCCGGCTATGGCAGCCAAGAAAATTATCAGGA GATCCTGATGCGCCGAGGGCGCACTCCACTCATTCCCTATACGATGTTCCAAAAAGAGAAGACGCGAAAATGGCGTGATA ATCCTTTTAACCTCGTCAACTGGTCCTATGATGAAACGAACGATCAATTTATATGTCCGAACGGACAGGACGTGACGTTC CGTTACATGTCCAAGAGGACGGATCGCTATGGCTTCACCCGTGATTTTAAGGTGTACGAAAGTGAGAGTTGTGATGACTG CCCACTTCGATCCCTCTGTACCAAAGCAGAGAACGGTCGTCATCGCCAAGTCCGAGTAAACGTTTCGTGGGAAGAACAAA AAGAACAGGTAAAGGGCCTGCTTTCAGATCAAAAAACCGGAAAAATCTACGCGAGACGTAAGACAGATGTAGAACCAGTT TTTGGAAATCTGAAGGCTAATTTGGGTTTCACTCGTTTTTCTGTAAGAGGAAAAGCGAAGGTGAAACGTGAGCTCGGTTT CATCCTTATGGCACTAAATTTGAGAAAGTGGCTCACCCAAAGTATTGCCCGAGGGGCAATTTGA Protein sequence : MFKNYNMNQLVLPLDLEIRLHENDIAFAVHHLVESIPDEAFEPFTRTTGCPAYHPRMMMKIILCAYTQSVFSGRKIEGLL QDSLRMMWLAQGNEPSYRTINRFRVHPAVTPILKQAFVTFRCHLVEMGEIKEEAIFIDGTKLEANANRYTFVWRKSVERY SASLVEKSNLLYEELVAQEILPEIERESPDELTIPELEHIGDVLEERIASINQEIETSSDTQERKRLRSERKQPHLFRKK VAEFVERKRKYAVHKETFDGRNSYSKTDTDATFMRMKEDHMQNGQLKPGYNVQIATEGQYTLAYDIYPNPTDARTLIPFL DEVASYLTLPEHIVADAGYGSQENYQEILMRRGRTPLIPYTMFQKEKTRKWRDNPFNLVNWSYDETNDQFICPNGQDVTF RYMSKRTDRYGFTRDFKVYESESCDDCPLRSLCTKAENGRHRQVRVNVSWEEQKEQVKGLLSDQKTGKIYARRKTDVEPV FGNLKANLGFTRFSVRGKAKVKRELGFILMALNLRKWLTQSIARGAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAUSA300_0034 | YP_492755.1 | IS1272, transposase | Not tested | Type-IV SCCmec | Protein | 1e-120 | 54 |
| SACOL0036 | YP_184947.1 | IS1272 transposase | Not tested | Type-I SCCmec | Protein | 7e-123 | 54 |
| SAMSHR1132_00350 | YP_005324559.1 | putative transposase | Not tested | Type-IIIinv SCCmec | Protein | 7e-123 | 54 |
| MW0034 | NP_644849.1 | hypothetical protein | Not tested | Type-IV SCCmec | Protein | 7e-123 | 54 |
| unnamed | BAA86649.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 5e-123 | 54 |
| unnamed | BAC67565.1 | hypothetical protein | Not tested | Type-IVc SCCmec | Protein | 2e-101 | 53 |
| tnp | YP_254534.1 | IS1272 transposase | Not tested | ¥ðSh2 | Protein | 1e-115 | 53 |
| SE0076 | NP_763631.1 | transposase | Not tested | SCCpbp4 | Protein | 2e-132 | 51 |
