|
Name : epsE (Curi_c07240) Accession : YP_006787644.1 Strain : Clostridium acidurici 9a Genome accession: NC_018664 Putative virulence/resistance : Virulence Product : type II secretion pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 810330 - 812018 bp Length : 1689 bp Strand : + Note : - DNA sequence : ATGCTTCAAAGAAAGAATAGGAAAATAGGAGAACTTTTATTAGAGATAGGACTGATTACTAATAAACAGCTTAAAGAAGC ACTTAAAGTTCAGAAAGTAGTAGGTAAAAAGTTAGGTGAAATTCTTAATGACGAGGGAATGGTTAGTGAACAACAGATAA TAGAGGTTCTAGAGCTTCAATTAGGAATACCGCATATGGATATAAGTAAGTTCTTTATAAGTCTTGAAGCAACTAAACTT ATAGATGAAGTACTAGCTAGAAGATATACTCTAATACCTATATCTAAGACAGAAACAACTTTAGTAGTGGCGATGACAGA TCCAACTAATATATTTGCAATAGACGATATAAGAATGTCGACTGAACTAAATATAAAGCCAGTAATATCTACAAAAATAC ATATATTAAATGCTATAGATCAATATTATGGGACAGAAAATGCTAAAAAGGCATTAAAAGAGTTTGAACAAAAAGACTAT ATGAAACATCTAGAAGTATTAGATCAAGAAGAATTAGATGAAGTAAATAATGCACCAGTAGTTAAGCTGGTAAACTCCAT AATAGGTCAATCAGTAAGGCAAAAAGTAAGTGATATACATATAGAACCATTTGAGAAATACATAAAAATTAGATTAAGAG TAGATGGAGACTTGCAAGAGATTATGACACCATCAAAATCAGTTCATTCAGCTATATTATCAAGAATAAAGATAATGGCT AAGATGAACATAGTGGAAAAGAGGATTCCACAAGATGGAAGAATAGAAATGATAATTGATGGTAGAGCTATAGATATGAG GGTCTCAATAATTCCGACAATTCACGGAGAAAAAGCAGTTATAAGAATATTAGACAGTGAAAGTTTTATGCTAACTAAAA AAGAACTAGGTTTTACAGAGGAGAATTTAAAAAAAATTGATAATTTAATAAAAAACTCTAATGGAATAATACTAGTCACA GGACCTACGGGTAGTGGTAAGAGCACAACACTGTACACAGTCCTAAGAGAATTAAGCGATCCAAGAAGAAATATAATAAC AATAGAGGAACCAGTGGAGTTTCAGATAGAAGGCATAAATCAAGTAAATGTAAATCCAAAAGTAGGTATGACATTTGCAA ATGCACTAAGATCTATATTAAGACAAGACCCTGACATAATAATGATAGGGGAGATAAGGGATGAGGAAACAGCACAGATA GCAATAAGGGCAGCAATAACTGGACATTTAGTATTAAGTACAATGCATACTAATGACACGTCGTCTACAGTAGCAAGGCT AATAGATATAGGTATAGATTCCTATTTAGTTTCATCATCACTGAAGGGAGTAGTAGCACAAAGATTAGTGAAGCGAATAT GTCAAAACTGTAAAATATCTTATAAAGCTAATATGGAAGAAAAAAAGATACTTTCTATAGATGAAGATGAAGACATAATA ATACATAAAGGCAGAGGATGTAATACCTGTAATAGTACAGGCTATAAAGGAAGAATAGCAATTCATGAAATCTTAATAGT AGATAGTGAAATTAAAAAATTAATAGATAAAAATGCAACTACAGATGAAATAAGAGAAGAATCTAGAAAACAAGGAATGA AATCACTAAGAGATAGCTGTGTACAACTAGTTCTAAAAGGCATTACTACAGTGGAGGAAGTAATAGGGGTAGCTTACAGT CTAGAATAG Protein sequence : MLQRKNRKIGELLLEIGLITNKQLKEALKVQKVVGKKLGEILNDEGMVSEQQIIEVLELQLGIPHMDISKFFISLEATKL IDEVLARRYTLIPISKTETTLVVAMTDPTNIFAIDDIRMSTELNIKPVISTKIHILNAIDQYYGTENAKKALKEFEQKDY MKHLEVLDQEELDEVNNAPVVKLVNSIIGQSVRQKVSDIHIEPFEKYIKIRLRVDGDLQEIMTPSKSVHSAILSRIKIMA KMNIVEKRIPQDGRIEMIIDGRAIDMRVSIIPTIHGEKAVIRILDSESFMLTKKELGFTEENLKKIDNLIKNSNGIILVT GPTGSGKSTTLYTVLRELSDPRRNIITIEEPVEFQIEGINQVNVNPKVGMTFANALRSILRQDPDIIMIGEIRDEETAQI AIRAAITGHLVLSTMHTNDTSSTVARLIDIGIDSYLVSSSLKGVVAQRLVKRICQNCKISYKANMEEKKILSIDEDEDII IHKGRGCNTCNSTGYKGRIAIHEILIVDSEIKKLIDKNATTDEIREESRKQGMKSLRDSCVQLVLKGITTVEEVIGVAYS LE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-93 | 41 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-93 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| epsE | YP_006787644.1 | type II secretion pathway protein E | VFG2048 | Protein | 3e-95 | 41 |
