Gene Information

Name : ocd (Curi_c05820)
Accession : YP_006787503.1
Strain : Clostridium acidurici 9a
Genome accession: NC_018664
Putative virulence/resistance : Unknown
Product : ornithine cyclodeaminase Ocd
Function : -
COG functional category : -
COG ID : -
EC number : 4.3.1.12
Position : 645250 - 646266 bp
Length : 1017 bp
Strand : +
Note : -

DNA sequence :
GTGAAAGGAATAGATTATAATGGAAATTATAGTTTTAAAAAAGGAAGATATAAAAAAGTATTTACTATGAAAGATGCTAT
ACAGTCTTGTAAAGATGCTTTAGAACTGTATTCAAGAGGAAAAAGCGACATACCTTTAAGAATTAATATAGACATACCTA
ATCAAGATGCACAGAGTCTTTATATGCCAGGGTATGCAGCTGATGCAAATGCATTGGGAGTAAAAATAATATCTGTTTAT
CCAAACAATATAAAAAAAGGAATAAGTACAGTACCTGCTACAATGGTTCTTTTAGATAATGAGACTGGAGAGGTATGCTC
TCTGATAGATGGAACATATCTAACAAGAATAAGAACTGGTGCAGTAGCTGGAGCAGCTACAGATCTTTTATCTAGAAAAG
ATTCGAAGATTTTTAGTTTATTTGGTACTGGTGGACAGGCGGAAGAACAGCTTGAAGCAGTATTAACGATTAGGGATATA
GAAGAAGTTAGGGTTTATGATATTAATCCAGAAAATGCCGAGACATTTGTAAAAGCAATGAATGAAAAATTTGCGGATAA
ATTTAAGGTCAAAATAAATTCTGTTAAAAGTCCAGACGAAGCTGTGAAAGATGCAGATATAATAACTGCTGTTACTACGT
CAAAAAAGCCAGTATTCGATGGTAAACTTGTTAAGAAAGGTGCCCACATAAATGGAGTCGGATCATATACACCTGACATG
CAGGAATTAGATGAATATATAATATGTAATGCTGACAAATTATACGTAGATACAAGGGATGGTGCTTTAAACGAGAGTGG
TGATTTAATAATACCAATAAGACAAAATAAGTTTTCTGAAGATAGAGTTACTGGGGAACTGGGAGAACTAATAATGGGTT
CAATATCGTCTAGAGAAAATGAAGATGAAATCACATTATTCAAAACTGTTGGCAGTGGAGTGCTTGATATAGTTACAGCT
AGACGTATATATGAAAGAGCCTTAAAAGAGAAAATTGGACAATTCGTAGAAATTTAA

Protein sequence :
MKGIDYNGNYSFKKGRYKKVFTMKDAIQSCKDALELYSRGKSDIPLRINIDIPNQDAQSLYMPGYAADANALGVKIISVY
PNNIKKGISTVPATMVLLDNETGEVCSLIDGTYLTRIRTGAVAGAATDLLSRKDSKIFSLFGTGGQAEEQLEAVLTIRDI
EEVRVYDINPENAETFVKAMNEKFADKFKVKINSVKSPDEAVKDADIITAVTTSKKPVFDGKLVKKGAHINGVGSYTPDM
QELDEYIICNADKLYVDTRDGALNESGDLIIPIRQNKFSEDRVTGELGELIMGSISSRENEDEITLFKTVGSGVLDIVTA
RRIYERALKEKIGQFVEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0616 NP_814373.1 ornithine cyclodeaminase Not tested Not named Protein 7e-75 52
ef0124 AAM75325.1 EF0124 Not tested Not named Protein 5e-75 52